RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 HYAL3O43820 417 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LILRB5O75023 590 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DNAJB6O75190 326 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SOX30O94993 753 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NUDT14O95848 222 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GYPBP06028 91 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MTNR1AP48039 350 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 VSX2P58304 361 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PPP3R1P63098 170 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ABATP80404 500 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TRMT12Q53H54 448 aaKnown RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CNIH2Q6PI25 160 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 XKRXQ6PP77 449 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LINGO2Q7L985 606 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF655Q8N720 491 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 IL17RDQ8NFM7 739 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 HERVK_113Q902F9 699 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 C11orf24Q96F05 449 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TXNDC15Q96J42 360 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PTCHD1Q96NR3 888 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ERMAPQ96PL5 475 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DPEP2Q9H4A9 486 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SOHLH2Q9NX45 425 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 WSB2Q9NYS7 404 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 IKZF2Q9UKS7 526 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TMEM229AB2RXF0 380 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GIMD1P0DJR0 217 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF10P21506 573 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RAB28P51157 221 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ILF3Q12906 894 aaKnown RBP eCLIP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NXNL2Q5VZ03 156 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PPP2R2DQ66LE6 453 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF836Q6ZNA1 936 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TAF8Q7Z7C8 310 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CCDC190Q86UF4 302 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 LINC00471Q8N535 108 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR4K14Q8NGD5 310 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR4K13Q8NH42 304 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 WDR34Q96EX3 536 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PLA2G2FQ9BZM2 168 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 EPHX3Q9H6B9 360 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ICKQ9UPZ9 632 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SBF1O95248 1867 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RIIAD1A6NNX1 92 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GABRPO00591 440 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 FFAR1O14842 300 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ACVR2AP27037 513 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CTBP2P56545 445 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ATPAF1Q5TC12 328 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RASSF6Q6ZTQ3 369 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GPR135Q8IZ08 494 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TOMM5Q8N4H5 51 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DNAAF1Q8NEP3 725 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR8D4Q8NGM9 314 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR5K2Q8NHB8 316 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RAB7BQ96AH8 199 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ORAI1Q96D31 301 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CDCA4Q9BXL8 241 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SLC17A9Q9BYT1 436 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 BARHL1Q9BZE3 327 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MIXL1Q9H2W2 232 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MKKSQ9NPJ1 570 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ACSS1Q9NUB1 689 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 POMT1Q9Y6A1 747 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GXYLT2A0PJZ3 443 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 RHPN2P1A8MT19 583 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NPC1O15118 1278 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 EFEMP2O95967 443 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 YES1P07947 543 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GABRB1P18505 474 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 HK1P19367 917 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TRIM23P36406 574 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SLC1A3P43003 542 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SOX2P48431 317 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CRYBA2P53672 197 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 TEKQ02763 1124 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CRYZQ08257 329 aaKnown RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PHC2Q8IXK0 858 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 SLC44A3Q8N4M1 653 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 OR5T3Q8NGG3 340 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NEURL3Q96EH8 262 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ACTRT3Q9BYD9 372 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 NT5DC2Q9H857 520 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 GPN1Q9HCN4 374 aaPredicted RBP4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ACTR10Q9NZ32 417 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 DHDHQ9UQ10 334 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ALG5Q9Y673 324 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CDH10Q9Y6N8 788 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 MED13LQ71F56 2210 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CHURC1-FNTBB4DL54 471 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 CLEC3AO75596 197 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 PAPLNO95428 1278 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 HBQ1P09105 142 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ACSL1P33121 698 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ITPRIPL2Q3MIP1 535 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF793Q6ZN11 406 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 JAZF1Q86VZ6 243 aa4.61□□□□□ -1.67
SMAD4-202ENST00000398417 ZNF547Q8IVP9 402 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms