RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 CEP164Q9UPV0 1460 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 AFF2P51816 1311 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KIAA1324LA8MWY0 1029 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 RRHO14718 337 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 TIMM23O14925 209 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 IDH3BO43837 385 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ADAP1O75689 374 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CA1P00915 261 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 RAF1P04049 648 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RPN2P04844 631 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 APRTP07741 180 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SERPINF2P08697 491 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 DANCRP0C864 163 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 OCM2P0CE71 109 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 MLNP12872 115 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CD82P27701 267 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CDKN2CP42773 168 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ZNF84P51523 738 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CDH17Q12864 832 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CTTNQ14247 550 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 ETFDHQ16134 617 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ECSCRQ19T08 205 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 XKR6Q5GH73 641 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SP5Q6BEB4 398 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 C22orf42Q6IC83 251 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CHMP1BQ7LBR1 199 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 METTL4Q8N3J2 472 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 GTPBP8Q8N3Z3 284 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 JAGN1Q8N5M9 183 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 OR52N4Q8NGI2 321 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 WBP2Q969T9 261 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SENP5Q96HI0 755 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 POPDC2Q9HBU9 364 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 A4GALTQ9NPC4 353 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SLC17A7Q9P2U7 560 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PILRAQ9UKJ1 303 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ACSL5Q9ULC5 683 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PPP1R3CQ9UQK1 317 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PDE10AQ9Y233 779 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KLK4Q9Y5K2 254 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 A0A0U1RQS6 177 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 BCLAF3A2AJT9 711 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 SUPT3HO75486 399 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 FCN3O75636 299 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CCNB1P14635 433 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CHATP28329 748 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KCNJ2P63252 427 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 RAD51Q06609 339 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 FOXL1Q12952 345 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PAN3Q58A45 887 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 TMEM31Q5JXX7 168 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ADNP2Q6IQ32 1131 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 REEP3Q6NUK4 255 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 FAM198BQ6UWH4 519 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 Q6ZN92 141 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 DHDDSQ86SQ9 333 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CTAGE3PQ8IX95 158 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CMTM1Q8IZ96 169 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PAQR4Q8N4S7 273 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 OR9G4Q8NGQ1 327 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ADAMTS17Q8TE56 1095 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 TMEM174Q8WUU8 243 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 HPSE2Q8WWQ2 592 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 IRGQQ8WZA9 623 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 S100PBPQ96BU1 408 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ERGIC2Q96RQ1 377 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ADOQ96SZ5 270 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RBM24Q9BX46 236 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 SMYD3Q9H7B4 428 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SYBUQ9NX95 663 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 IL36GQ9NZH8 169 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 KLRF1Q9NZS2 232 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 EXOSC1Q9Y3B2 195 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 MYOM1P52179 1685 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RNF17Q9BXT8 1623 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 GJE1A6NN92 205 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 VWC2LB2RUY7 222 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 LPXNO60711 386 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ATP6AP2O75787 350 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 LCKP06239 509 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 HSD17B1P14061 328 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 IMPDH1P20839 514 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PLA2G5P39877 138 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CLDN20P56880 219 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 PITPNAQ00169 270 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 HLFQ16534 295 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 NKAIN1Q4KMZ8 207 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 NKAPLQ5M9Q1 402 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ADAD2Q8NCV1 583 aaKnown RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 ZNF548Q8NEK5 533 aaPredicted RBP3.24□□□□□ -1.89
XRN1-202ENST00000392981 RPLP0P6Q8NHW5 317 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 CCDC127Q96BQ5 260 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 SHISA4Q96DD7 197 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 GPR174Q9BXC1 333 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 RAB1BQ9H0U4 201 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 NMRAL1Q9HBL8 299 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ACKR4Q9NPB9 350 aa3.24□□□□□ -1.89
XRN1-202ENST00000392981 ZNF302Q9NR11 478 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms