RNA–Protein interactions for RNA: ENST00000375405.7

SCN1A-202, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,097 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-202ENST00000375405 EIF1P41567 113 aaKnown RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RTP1P59025 263 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 UBE2KP61086 200 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PHC1P78364 1004 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 HMGCS1Q01581 520 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CNN3Q15417 329 aaKnown RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MSMO1Q15800 293 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 Q56UQ5 140 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PAGE3Q5JUK9 113 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ELP2Q6IA86 826 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CCDC71Q8IV32 467 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ENTHD1Q8IYW4 607 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 TRMT2AQ8IZ69 625 aaKnown RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 COL21A1Q96P44 957 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MXRA8Q9BRK3 442 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 KCNK15Q9H427 330 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PREBQ9HCU5 417 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 UFSP2Q9NUQ7 469 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRDM4Q9UKN5 801 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 KDM5DQ9BY66 1539 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ANKUB1A6NFN9 424 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 KCNU1A8MYU2 1149 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRRG2O14669 202 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PIAS2O75928 621 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PAK4O96013 591 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRPS2P11908 318 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 F3P13726 295 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RAB3AP20336 220 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 DTYMKP23919 212 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CTSSP25774 331 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 GABRA3P34903 492 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 EMP1P54849 157 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MTPNP58546 118 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 C1orf61Q13536 156 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 TDGQ13569 410 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SNTB1Q13884 538 aaKnown RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MFSD5Q6N075 450 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF788Q6ZQV5 615 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 Q6ZRG5 221 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MOB3CQ70IA8 216 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 TGIF2LXQ8IUE1 241 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 OR5L2Q8NGL0 311 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 MBD3L1Q8WWY6 194 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 C1QTNF3Q9BXJ4 246 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RIMS4Q9H426 269 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 NOX3Q9HBY0 568 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 KCNJ16Q9NPI9 418 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 GABRQQ9UN88 632 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 FANCMQ8IYD8 2048 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRAMEF27A3QJZ7 478 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SOWAHBA6NEL2 793 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRAMEF25A6NGN4 478 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 TMEM88BA6NKF7 163 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 K7EPI3 171 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 DVL2O14641 736 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RETP07949 1114 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PF4V1P10720 104 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CRISP2P16562 243 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SDC1P18827 310 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 EN2P19622 333 aaPredicted RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SOX18P35713 384 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 AKR1C3P42330 323 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RPL32P62910 135 aaKnown RBP4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SLC14A1Q13336 389 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PEA15Q15121 130 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 NTRK3Q16288 839 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 IER5LQ5T953 404 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 VWA5B1Q5TIE3 1220 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 LINC00696Q6ZRV3 163 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ETFBKMTQ8IXQ9 262 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 OR5D16Q8NGK9 328 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 FBXO25Q8TCJ0 367 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CHST11Q9NPF2 352 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 PRDM7Q9NQW5 492 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ZNF835Q9Y2P0 537 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 A0A1W2PQJ5 194 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SHISA7A6NL88 538 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 AZIN1O14977 448 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SPINT2O43291 252 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 RBBP9O75884 186 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 TGDSO95455 350 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CTDNEP1O95476 244 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 FGF4P08620 206 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CD8BP10966 210 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 BMP2P12643 396 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 KCNAB2Q13303 367 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 LRIT3Q3SXY7 679 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 IGSF11Q5DX21 431 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 GPR153Q6NV75 609 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 SLC27A1Q6PCB7 646 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 THAP4Q8WY91 577 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 ADGRG7Q96K78 797 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 B4GALT6Q9UBX8 382 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 EMC9Q9Y3B6 208 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 UGGT1Q9NYU2 1555 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 CLPSL1A2RUU4 121 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 C9JVG2 144 aa4.39□□□□□ -1.71
SCN1A-202ENST00000375405 M0R233 179 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms