RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 NAA50Q9GZZ1 169 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 DSN1Q9H410 356 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 FOLH1BQ9HBA9 442 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 MKKSQ9NPJ1 570 aaPredicted RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CMC2Q9NRP2 79 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 UBQLN4Q9NRR5 601 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SEMA4GQ9NTN9 838 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 SIDT1Q9NXL6 827 aaKnown RBP8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 ETAA1Q9NY74 926 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 RPS6KB2Q9UBS0 482 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 TRAPPC4Q9Y296 219 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 CA5BQ9Y2D0 317 aa8.08□□□□□ -1.12
SNRNP40-202ENST00000373720 TRBV23OR9-2A0A075B6M9 112 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A0B4J2E0 115 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A1B0GTQ1 180 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 A0A1B0GX12 115 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TRDV1A0A1B0GX56 115 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ANKRD61A6NGH8 418 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CPSF4LA6NMK7 179 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 RIIAD1A6NNX1 92 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 B4DGG1 531 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NPIPB9F8W1W9 429 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ARPC3O15145 178 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TO15178 435 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 FOXS1O43638 330 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NARSO43776 548 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PRKYO43930 277 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PRKRAO75569 313 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PIAS2O75928 621 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 SERPINA3P01011 423 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PTHP01270 115 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TSPAN19P0C672 248 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CKMT1AP12532 417 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF3P17036 446 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 HK1P19367 917 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 F8A1P23610 371 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 LSSP48449 732 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 EMDP50402 254 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 VBP1P61758 197 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PSG6Q00889 435 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 INSM1Q01101 510 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ACY1Q03154 408 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PIGFQ07326 219 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CDC20Q12834 499 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ATP1A4Q13733 1029 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ELAVL1Q15717 326 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 LTB4RQ15722 352 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 EMC4Q5J8M3 183 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 LCN1P1Q5VSP4 162 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 MEPCEQ7L2J0 689 aaKnown RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ATCAYQ86WG3 371 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CLIP4Q8N3C7 705 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 D2HGDHQ8N465 521 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ACBD7Q8N6N7 88 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 POMGNT2Q8NAT1 580 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 OR52R1Q8NGF1 315 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 OR52I1Q8NGK6 324 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 OR51Q1Q8NH59 317 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 SGCDQ92629 289 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 THRSPQ92748 146 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 BPIFA2Q96DR5 249 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ERLEC1Q96DZ1 483 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 HSPBAP1Q96EW2 488 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC41A2Q96JW4 573 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 KCTD7Q96MP8 289 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 FCRL4Q96PJ5 515 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NRTNQ99748 197 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ARHGAP9Q9BRR9 750 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TMEM43Q9BTV4 400 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NDC1Q9BTX1 674 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TGIF2Q9GZN2 237 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NUAK2Q9H093 628 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 OR10A5Q9H207 317 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TTYH1Q9H313 450 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 C11orf16Q9NQ32 467 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 TOR4AQ9NXH8 423 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 ZNF223Q9UK11 482 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CBLCQ9ULV8 474 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 SLC7A7Q9UM01 511 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 GPR55Q9Y2T6 319 aaPredicted RBP8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 CHST2Q9Y4C5 530 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 NOX1Q9Y5S8 564 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 KCNE3Q9Y6H6 103 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 PLXND1Q9Y4D7 1925 aa8.07□□□□□ -1.12
SNRNP40-202ENST00000373720 MDC1Q14676 2089 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 FRG2CA6NGY1 282 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 SERINC4A6NH21 518 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 CCDC85CA6NKD9 419 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 HSPB2A8KAH6 182 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 SGK494L7N484 410 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 DSCR3O14972 297 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 BCAT2O15382 392 aaPredicted RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 EIF4E2O60573 245 aaKnown RBP8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 TPST2O60704 377 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 LDB3O75112 727 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 PTP4A3O75365 173 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 RDH16O75452 317 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 NDUFB2O95178 105 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 IL33O95760 270 aa8.06□□□□□ -1.12
SNRNP40-202ENST00000373720 ONECUT2O95948 504 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms