RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 CPPED1Q9BRF8 314 aaPredicted RBP10.75□□□□□ -0.69
PTPRF-203ENST00000372407 STRADBQ9C0K7 418 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 FN3KQ9H479 309 aa10.75□□□□□ -0.69
PTPRF-203ENST00000372407 SSX5O60225 188 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 RFPL3O75679 317 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 IFNA1P01562 189 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 NR0B1P51843 470 aaKnown RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 COL9A2Q14055 689 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 LRRC26Q2I0M4 334 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 FAM69AQ5T7M9 428 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 UBE2UQ5VVX9 321 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 AWAT2Q6E213 333 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 CHPT1Q8WUD6 406 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 CDC6Q99741 560 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 APOOQ9BUR5 198 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF888P0CJ79 500 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 TIMP2P16035 220 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 HOXD9P28356 352 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 GLO1Q04760 184 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SELPLGQ14242 412 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 NKPD1Q17RQ9 610 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 CTSL3PQ5NE16 218 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 FAM69BQ5VUD6 431 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 FAM83HQ6ZRV2 1179 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 PARS2Q7L3T8 475 aaKnown RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SPRED1Q7Z699 444 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 TMEM102Q8N9M5 508 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 PHOSPHO2Q8TCD6 241 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZDHHC1Q8WTX9 485 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 NECTIN4Q96NY8 510 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 C8orf33Q9H7E9 229 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ACTR10Q9NZ32 417 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 RASD1Q9Y272 281 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 RNF215Q9Y6U7 377 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF831Q5JPB2 1677 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 A0A1B0GVG6 124 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SMCO3A2RU48 225 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 MPIG6BO95866 241 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF26P17031 533 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 AHRP35869 848 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 HNRNPFP52597 415 aaKnown RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 DLX5P56178 289 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 CSNK2A1P68400 391 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SPCS2Q15005 226 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 AADACL4Q5VUY2 407 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 FCRLBQ6BAA4 426 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 UNQ6126/PRO20091Q6UXV3 157 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF611Q8N823 705 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 CSNK2A3Q8NEV1 391 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SDR9C7Q8NEX9 313 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 TRMT2BQ96GJ1 504 aaKnown RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 VRK1Q99986 396 aaPredicted RBP10.74□□□□□ -0.69
PTPRF-203ENST00000372407 SLC46A2Q9BY10 475 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 MFFQ9GZY8 342 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 MAST2Q6P0Q8 1798 aa10.74□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF736B4DX44 427 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 C1orf105O95561 183 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CSF1P09603 554 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PRLHRP49683 370 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 AKR1C2P52895 323 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 HOXC5Q00444 222 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PRDX1Q06830 199 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 RSU1Q15404 277 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SYPL1Q16563 259 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PGGHGQ32M88 737 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 Q6ZSR9 355 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CYP4V2Q6ZWL3 525 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 KCTD20Q7Z5Y7 419 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF761Q86XN6 746 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZNF649Q9BS31 505 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 NAA50Q9GZZ1 169 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 INPP5EQ9NRR6 644 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 FAM86C1Q9NVL1 165 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 FAM183AA6NL82 134 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 LILRB3O75022 631 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 UGT2B7P16662 529 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CDK2P24941 298 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 CAMLGP49069 296 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SLC7A9P82251 487 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PRAMEF8Q5VWM4 474 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PRAMEF7Q5VXH5 474 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 LRRC28Q86X40 367 aaPredicted RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 OR8J2Q8NGG1 315 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 TBC1D15Q8TC07 691 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 TMEM163Q8TC26 289 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 RPL3LQ92901 407 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 TCRBV5S1A1TA0A578 114 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 TRIM64A6NGJ6 449 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ZBTB42B2RXF5 422 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 H0YIV9 168 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 UBFD1O14562 309 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 ARPC1BO15143 372 aaKnown RBP10.73□□□□□ -0.69
PTPRF-203ENST00000372407 HOXC13P31276 330 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 AQP2P41181 271 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 DSC1Q08554 894 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 PPA1Q15181 289 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 EEF1A1P5Q5VTE0 462 aa10.73□□□□□ -0.69
PTPRF-203ENST00000372407 SLC6A19Q695T7 634 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms