RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 LMF1Q96S06 567 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 BARD1Q99728 777 aaKnown RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 PSD2Q9BQI7 771 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 WFDC6Q9BQY6 131 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 GPR87Q9BY21 358 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 NMNAT1Q9HAN9 279 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 RLIMQ9NVW2 624 aa12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF223Q9UK11 482 aaPredicted RBP12.75□□□□□ -0.37
PDLIM5-203ENST00000359265 CLDN24A6NM45 220 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 H0YAE9 185 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 FMO6PO60774 539 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 SEMA7AO75326 666 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 DXOO77932 396 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 OR5F1O95221 314 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 UTS2O95399 124 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 SNAP29O95721 258 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 HPGDP15428 266 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 MMP11P24347 488 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 ELAVL4P26378 380 aaKnown RBP12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 CAPGP40121 348 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 STAT5AP42229 794 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 ST3GAL3Q11203 375 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 PIN1Q13526 163 aaPredicted RBP12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 TRAM2Q15035 370 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 EXT1Q16394 746 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 DCST1Q5T197 706 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 KDM4DQ6B0I6 523 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 PRR22Q8IZ63 422 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 MARVELD2Q8N4S9 558 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 LINC00471Q8N535 108 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF555Q8NEP9 628 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 CYGBQ8WWM9 190 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 OMA1Q96E52 524 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 MESP1Q9BRJ9 268 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF700Q9H0M5 742 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 ANKRD19PQ9H560 264 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 UBQLN4Q9NRR5 601 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 KRT84Q9NSB2 600 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 TCFL5Q9UL49 500 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 SLC35A3Q9Y2D2 325 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 HS3ST3B1Q9Y662 390 aa12.74□□□□□ -0.37
PDLIM5-203ENST00000359265 IGHV1-45A0A0A0MS14 117 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 A0A1W2PQ72 361 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 A0A1W2PRQ8 180 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CDC14CA4D256 554 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 SERINC4A6NH21 518 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CPSF4LA6NMK7 179 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 SCDO00767 359 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 TLX3O43711 291 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 PRKNO60260 465 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 TSPAN2O60636 221 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ZFAND5O76080 213 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CSTAP01040 98 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 COX6A1P12074 109 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CYP4B1P13584 511 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 DAPP51397 102 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF136P52737 540 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 PNLIPRP2P54317 469 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 DNASE1L3Q13609 305 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 DGCR6Q14129 220 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 BTBD16Q32M84 506 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ENTPD8Q5MY95 495 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF550Q7Z398 422 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CHERPQ8IWX8 916 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF440Q8IYI8 595 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CNOT9Q92600 299 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 TFAP2CQ92754 450 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 CNBD2Q96M20 576 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ANKRD60Q9BZ19 345 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 TOR3AQ9H497 397 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ZNF556Q9HAH1 456 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 DNAJB12Q9NXW2 375 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 ENOPH1Q9UHY7 261 aa12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 TMEFF2Q9UIK5 374 aaPredicted RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 FARSAQ9Y285 508 aaKnown RBP12.73□□□□□ -0.37
PDLIM5-203ENST00000359265 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 DOPEY2Q9Y3R5 2298 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 NSG1A0A0A6YYJ2 146 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 TRBV4-1A0A0J9YWV2 114 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 SH3PXD2BA1X283 911 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 TRAPPC13A5PLN9 417 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 B8ZZF3 427 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 H3BNH8 94 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 CYP7B1O75881 506 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 NGFRP08138 427 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 RPSAP08865 295 aaKnown RBP12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 GKN3PP0CG01 181 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 ITGAMP11215 1152 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 TBXA2RP21731 343 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 ABCD3P28288 659 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 DLSTP36957 453 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 RNF144AP50876 292 aaPredicted RBP12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 IL1RL1Q01638 556 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 EFR3AQ14156 821 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 RTP5Q14D33 572 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 PDK3Q15120 406 aa12.72□□□□□ -0.37
PDLIM5-203ENST00000359265 ZIK1Q3SY52 487 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms