RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 STAG3L3P0CL85 134 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 HOXA5P20719 270 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 DTYMKP23919 212 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 MIPP30301 263 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SLC1A2P43004 574 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 OR3A1P47881 315 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 LUMP51884 338 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TRA2BP62995 288 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SIM1P81133 766 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 IRF8Q02556 426 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CAMK2GQ13555 558 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ARL6IP1Q15041 203 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 GSG1Q2KHT4 349 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ZNF529Q6P280 563 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ARMCX2Q7L311 632 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 VRK3Q8IV63 474 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 NAXDQ8IW45 347 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 BPIFB2Q8N4F0 458 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 FBLIM1Q8WUP2 373 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 RXFP2Q8WXD0 754 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 OSTF1Q92882 214 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 S100A13Q99584 98 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 MFRPQ9BY79 579 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TRPV4Q9HBA0 871 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SMCO3A2RU48 225 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 H0YIV9 168 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 M0QZK8 103 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SCDO00767 359 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CXCL8P10145 99 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 FOLR2P14207 255 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 RCC1P18754 421 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 GLP1RP43220 463 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 MRPL19P49406 292 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CSNK1EP49674 416 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 EFNA5P52803 228 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SOX8P57073 446 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 LAMTOR4Q0VGL1 99 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CSHL1Q14406 222 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 UBXN2BQ14CS0 331 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 LY6KQ17RY6 165 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CARD16Q5EG05 197 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ZNF664Q8N3J9 261 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 C11orf42Q8N5U0 333 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 FAM181AQ8N9Y4 354 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 OR1L6Q8NGR2 347 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 GPR148Q8TDV2 347 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 KCTD7Q96MP8 289 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 URM1Q9BTM9 101 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TPSD1Q9BZJ3 242 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ATXN3LQ9H3M9 355 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 ABHD16BQ9H3Z7 469 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 NSUN3Q9H649 340 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 RPF1Q9H9Y2 349 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 MEAF6Q9HAF1 191 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 EXOSC3Q9NQT5 275 aaKnown RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CA10Q9NS85 328 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 GPATCH2LQ9NWQ4 482 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 FOXJ2Q9P0K8 574 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 DOK5Q9P104 306 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 IFITM10A6NMD0 228 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 M0R296 226 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 B4GALT5O43286 388 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SLC25A12O75746 678 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 AK1P00568 194 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 UCHL1P09936 223 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TTPAP49638 278 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 EVX1P49640 407 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 CDKN1CP49918 316 aaPredicted RBP8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 VAMP2P63027 116 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 GAGE1Q13065 139 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TMEM255AQ5JRV8 349 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 NSUN5P2Q63ZY6 315 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 TECPR1Q7Z6L1 1165 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 PPP1R3BQ86XI6 285 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 OR8J3Q8NGG0 315 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 HHATLQ9HCP6 504 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 POT1Q9NUX5 634 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 SLC35A3Q9Y2D2 325 aa8.36□□□□□ -1.07
RBFOX1-203ENST00000355637 NUP214P35658 2090 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 TBC1D3FA6NER0 549 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ZFPL1O95159 310 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ACAA2P42765 397 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 BDKRB1P46663 353 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 TFPI2P48307 235 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ITGA1P56199 1179 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 UFM1P61960 85 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 OLIG2Q13516 323 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ODF1Q14990 250 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ATXN7L3Q14CW9 347 aaPredicted RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 ELAVL1Q15717 326 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 SPIN4Q56A73 249 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 KCTD9Q7L273 389 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 CHST13Q8NET6 341 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 OR10R2Q8NGX6 335 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 NUDT8Q8WV74 236 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 FAM120BQ96EK7 910 aaKnown RBP8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 SCLYQ96I15 445 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 TMEM134Q9H6X4 195 aa8.35□□□□□ -1.07
RBFOX1-203ENST00000355637 TXNL4BQ9NX01 149 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms