RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 ZFAND5O76080 213 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 TNFSF15O95150 251 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 RYKP34925 604 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 ACAA2P42765 397 aaKnown RBP18.87■□□□□ 0.61
TRIM4-202ENST00000354241 PNLIPRP2P54317 469 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 PSPHP78330 225 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 RPP38P78345 283 aaKnown RBP18.87■□□□□ 0.61
TRIM4-202ENST00000354241 IL18R1Q13478 541 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 CD226Q15762 336 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 GRHL3Q8TE85 626 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 TMEM255BQ8WV15 326 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 SLC35B4Q969S0 331 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 DGCR6LQ9BY27 220 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF700Q9H0M5 742 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 ZBTB20Q9HC78 741 aaPredicted RBP18.87■□□□□ 0.61
TRIM4-202ENST00000354241 MYRFQ9Y2G1 1151 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 PCDHGA6Q9Y5G7 932 aa18.87■□□□□ 0.61
TRIM4-202ENST00000354241 UBL4AP11441 157 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 COX6A1P12074 109 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 MMP11P24347 488 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 GSSP48637 474 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 BLMHQ13867 455 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 APOOLQ6UXV4 268 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 Q6ZPB1 254 aaPredicted RBP18.86■□□□□ 0.61
TRIM4-202ENST00000354241 ZER1Q7Z7L7 766 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 PARP8Q8N3A8 854 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 OR8K3Q8NH51 312 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 ACOT11Q8WXI4 607 aaPredicted RBP18.86■□□□□ 0.61
TRIM4-202ENST00000354241 POLR1BQ9H9Y6 1135 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 ENOPH1Q9UHY7 261 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 TCFL5Q9UL49 500 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 NDRG4Q9ULP0 352 aaKnown RBP18.86■□□□□ 0.61
TRIM4-202ENST00000354241 NPFFR2Q9Y5X5 522 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 WDFY3Q8IZQ1 3526 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 EXPH5Q8NEV8 1989 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 GTPBP1O00178 669 aaKnown RBP18.86■□□□□ 0.61
TRIM4-202ENST00000354241 DKK1O94907 266 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 IGHEP01854 428 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 RAB40ALP0C0E4 278 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 PTNP21246 168 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 IL5RAQ01344 420 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 FNDC7Q5VTL7 733 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 PRICKLE2Q7Z3G6 844 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 APLFQ8IW19 511 aaPredicted RBP18.86■□□□□ 0.61
TRIM4-202ENST00000354241 ESX1Q8N693 406 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 SETD9Q8NE22 299 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 PHOX2BQ99453 314 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 APOL4Q9BPW4 351 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 TRIM2Q9C040 744 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF696Q9H7X3 374 aa18.86■□□□□ 0.61
TRIM4-202ENST00000354241 TMEM200CA6NKL6 621 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 H3BNH8 94 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 ELK4P28324 431 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 IFNGR2P38484 337 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 ADH7P40394 386 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 C1orf94Q6P1W5 598 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF613Q6PF04 617 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 KIRREL2Q6UWL6 708 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 LSRQ86X29 649 aaPredicted RBP18.85■□□□□ 0.61
TRIM4-202ENST00000354241 MEX3DQ86XN8 651 aaKnown RBP18.85■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF440Q8IYI8 595 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 CADM2Q8N3J6 435 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 TMCO5AQ8N6Q1 288 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 TOR1AIP2Q8NFQ8 470 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 PIGXQ8TBF5 258 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 PITX2Q99697 317 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 PRSS27Q9BQR3 290 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 DEFB126Q9BYW3 111 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 FARSAQ9Y285 508 aaKnown RBP18.85■□□□□ 0.61
TRIM4-202ENST00000354241 HEATR5AQ86XA9 2040 aa18.85■□□□□ 0.61
TRIM4-202ENST00000354241 PPM1BO75688 479 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 POU1F1P28069 291 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OTX2P32243 289 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 RPS15P62841 145 aaKnown RBP18.84■□□□□ 0.61
TRIM4-202ENST00000354241 MARCH9Q86YJ5 346 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 NLGN4XQ8N0W4 816 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OR5M3Q8NGP4 307 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 GNPDA2Q8TDQ7 276 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 TBL1XR1Q9BZK7 514 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 RPS6KB2Q9UBS0 482 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 CARD8Q9Y2G2 431 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 A0A1B0GWA3 101 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OR6C70A6NIJ9 312 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 SOCS6O14544 535 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OIP5O43482 229 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 PIP5K1CO60331 668 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 ZNF354AO60765 605 aaPredicted RBP18.84■□□□□ 0.61
TRIM4-202ENST00000354241 LYPD3O95274 346 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 SOX14O95416 240 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 OSMP13725 252 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 CCR4P51679 360 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 RPS6KA3P51812 740 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 LIMK1P53667 647 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 ESRRGP62508 458 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 CD47Q08722 323 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 EXT1Q16394 746 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 MEP1AQ16819 746 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 WDR88Q6ZMY6 472 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 MBOAT2Q6ZWT7 520 aa18.84■□□□□ 0.61
TRIM4-202ENST00000354241 MARCH3Q86UD3 253 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms