RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GALR3O60755 368 aaPredicted RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 CLPXO76031 633 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 GNALP38405 381 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 NR0B1P51843 470 aaKnown RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 RAP1BP61224 184 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 RAP1AP62834 184 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 KCNJ10P78508 379 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 TSPAN31Q12999 210 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 PIN1Q13526 163 aaPredicted RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 PUM1Q14671 1186 aaKnown RBP eCLIP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 HES5Q5TA89 166 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 PEG10Q86TG7 708 aaKnown RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 EID2Q8N6I1 236 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 TEX19Q8NA77 164 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 ZMAT5Q9UDW3 170 aaKnown RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 ATE1O95260 518 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 P04436 131 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 THBS1P07996 1170 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 HTR2BP41595 481 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 COTL1Q14019 142 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 TMEM31Q5JXX7 168 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 C18orf63Q68DL7 685 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 OPN5Q6U736 354 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 YIPF7Q8N8F6 280 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 THAP4Q8WY91 577 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 FAM46AQ96IP4 442 aaKnown RBP11.36□□□□□ -0.59
SMAD9-201ENST00000350148 PLEKHA1Q9HB21 404 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 FOLH1BQ9HBA9 442 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 STARD5Q9NSY2 213 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 THSD7BQ9C0I4 1608 aa11.36□□□□□ -0.59
SMAD9-201ENST00000350148 H0Y8X5 98 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SLC16A6O15403 523 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 MTNR1AP48039 350 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 TIAL1Q01085 375 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 RASGEF1BQ0VAM2 473 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF404Q494X3 552 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 CNN2Q99439 309 aaKnown RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 PRMT8Q9NR22 394 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SPHK1Q9NYA1 384 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 LAMP5Q9UJQ1 280 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 HCN2Q9UL51 889 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 PCDHGB6Q9Y5F9 930 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SOX1O00570 391 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 YY2O15391 372 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 PRODHO43272 600 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF749O43361 778 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 KHDRBS3O75525 346 aaKnown RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SCRG1O75711 98 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 GLB1P16278 677 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 IL18Q14116 193 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SPHARQ15513 63 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 LEXMQ3ZCV2 418 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 CCDC71Q8IV32 467 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 UBE2J2Q8N2K1 259 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 TPK1Q9H3S4 243 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 GAREM1Q9H706 876 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 NKIRAS2Q9NYR9 191 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 CHP2O43745 196 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 MITFO75030 526 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 HOXC12P31275 282 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 CAMK1Q14012 370 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 FRMPD2BQ6IN97 320 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 MS4A15Q8N5U1 240 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 FGF21Q9NSA1 209 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SNTG1Q9NSN8 517 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF26P17031 533 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 CD79BP40259 229 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 TEKQ02763 1124 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 RAB40BQ12829 278 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 BTBD16Q32M84 506 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 ELF4Q99607 663 aaPredicted RBP11.35□□□□□ -0.59
SMAD9-201ENST00000350148 GDF15Q99988 308 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 SLC39A1Q9NY26 324 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 PCDHGB2Q9Y5G2 931 aa11.35□□□□□ -0.59
SMAD9-201ENST00000350148 OR6C76A6NM76 312 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 EFCAB7A8K855 629 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 CSF2P04141 144 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 MAP3K8P41279 467 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 NR4A2P43354 598 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ENTPD8Q5MY95 495 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZSCAN1Q8NBB4 408 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 MGLLQ99685 303 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR10A5Q9H207 317 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 J3QLW9 94 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SYNGR4O95473 234 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF19P17023 458 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GPR4P46093 362 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 MAB21L1Q13394 359 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 GPR139Q6DWJ6 353 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 PODNL1Q6PEZ8 512 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF517Q6ZMY9 492 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 DCDC5Q6ZRR9 648 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 LILRA2Q8N149 483 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 OR9Q2Q8NGE9 314 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 TCTEX1D2Q8WW35 142 aa11.34□□□□□ -0.59
SMAD9-201ENST00000350148 LCORQ96JN0 433 aaPredicted RBP11.34□□□□□ -0.59
SMAD9-201ENST00000350148 SLC22A4Q9H015 551 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms