RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MISPQ8IVT2 679 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 PROK2Q9HC23 129 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 KLRF1Q9NZS2 232 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 CNIH4Q9P003 139 aa24.75■■□□□ 1.55
SSBP4-202ENST00000348495 ANKRD33BA6NCL7 494 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 C17orf51A8MQB3 221 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 NEURL1O76050 574 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 ATP6V1G2O95670 118 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 GKN3PP0CG01 181 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 CASRP41180 1078 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 ACAA2P42765 397 aaKnown RBP24.74■■□□□ 1.55
SSBP4-202ENST00000348495 CBLN3Q6UW01 205 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 IGFL2Q6UWQ7 119 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 FRMD6Q96NE9 622 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 ANGPTL4Q9BY76 406 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 LAT2Q9GZY6 243 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 RNPEPL1Q9HAU8 725 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 AGPAT4Q9NRZ5 378 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 LRFN1Q9P244 771 aa24.74■■□□□ 1.55
SSBP4-202ENST00000348495 STX18Q9P2W9 335 aaKnown RBP24.74■■□□□ 1.55
SSBP4-202ENST00000348495 GTPBP1O00178 669 aaKnown RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 FCGR1AP12314 374 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 ITGA2P17301 1181 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 OC90Q02509 493 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF117Q03924 483 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 SLC30A6Q6NXT4 461 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 TSPYL5Q86VY4 417 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF440Q8IYI8 595 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 SNRNP27Q8WVK2 155 aaKnown RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 ZCCHC14Q8WYQ9 949 aaKnown RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 LRTOMTQ8WZ04 291 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 OSBPL11Q9BXB4 747 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 PLA2G3Q9NZ20 509 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 NKX1-2Q9UD57 310 aaPredicted RBP24.73■■□□□ 1.55
SSBP4-202ENST00000348495 CARD8Q9Y2G2 431 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 WIF1Q9Y5W5 379 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 CHD8Q9HCK8 2581 aa24.73■■□□□ 1.55
SSBP4-202ENST00000348495 EIF4E2O60573 245 aaKnown RBP24.72■■□□□ 1.55
SSBP4-202ENST00000348495 F10P00742 488 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ANPEPP15144 967 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 FASP25445 335 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 HOXC5Q00444 222 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ATP6AP1Q15904 470 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 DEF8Q6ZN54 512 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF550Q7Z398 422 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PQLC1Q8N2U9 271 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 DUSP19Q8WTR2 217 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 HAS2Q92819 552 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PKP2Q99959 881 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ACAD8Q9UKU7 415 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ICAM5Q9UMF0 924 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 IGLV3-32A0A0A0MS00 114 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 B4DXG7 233 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 FFAR1O14842 300 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 FMO6PO60774 539 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 DIRAS1O95057 198 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PRSS23O95084 383 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 RHCEP18577 417 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 C17orf67Q0P5P2 114 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PRAMEF20Q5VT98 475 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 SPINK14Q6IE38 97 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 HMBOX1Q6NT76 420 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PSD4Q8NDX1 1056 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 SIGLEC12Q96PQ1 595 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF347Q96SE7 839 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 PRR14Q9BWN1 585 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 RIMS3Q9UJD0 308 aa24.72■■□□□ 1.55
SSBP4-202ENST00000348495 ANKRD11Q6UB99 2663 aaPredicted RBP24.71■■□□□ 1.55
SSBP4-202ENST00000348495 LOC400499M0QZD8 3231 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 OR5H15A6NDH6 313 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 J3KTA2 159 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 HCRTR2O43614 444 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 DPM1O60762 260 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 HTR2AP28223 471 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 EPS8Q12929 822 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 OR1C1Q15619 314 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 ZNF605Q86T29 641 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 ARSGQ96EG1 525 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 SMAD5Q99717 465 aaKnown RBP24.71■■□□□ 1.55
SSBP4-202ENST00000348495 TESQ9UGI8 421 aaKnown RBP24.71■■□□□ 1.55
SSBP4-202ENST00000348495 A4GNTQ9UNA3 340 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 HRH3Q9Y5N1 445 aa24.71■■□□□ 1.55
SSBP4-202ENST00000348495 C2orf72A6NCS6 295 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 TMEM8BA6NDV4 472 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 CLOCKO15516 846 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 CYP7B1O75881 506 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 YAP1P46937 504 aaKnown RBP24.7■■□□□ 1.54
SSBP4-202ENST00000348495 OR2T5Q6IEZ7 315 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 RANBP3LQ86VV4 465 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-202ENST00000348495 MDS2Q8NDY4 140 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 OR2T29Q8NH02 315 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 MCHR1Q99705 422 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 PIP5K1AQ99755 562 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 SDHAF3Q9NRP4 125 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 SACM1LQ9NTJ5 587 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 C6orf203Q9P0P8 240 aaPredicted RBP24.7■■□□□ 1.54
SSBP4-202ENST00000348495 DNAJB9Q9UBS3 223 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 EML6Q6ZMW3 1958 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 PTPRQQ9UMZ3 2332 aa24.7■■□□□ 1.54
SSBP4-202ENST00000348495 AP3D1O14617 1153 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms