RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 MOB1BQ7L9L4 216 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 TMEM151BQ8IW70 566 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 RDH10Q8IZV5 341 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 STEAP2Q8NFT2 490 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 TMEM239Q8WW34 195 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 PEX11GQ96HA9 241 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 CDCA3Q99618 268 aaPredicted RBP12.34□□□□□ -0.43
HLCS-201ENST00000336648 GORASP2Q9H8Y8 452 aa12.34□□□□□ -0.43
HLCS-201ENST00000336648 MYO5BQ9ULV0 1848 aa12.33□□□□□ -0.43
HLCS-201ENST00000336648 TOR1AO14656 332 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 ZNF679Q8IYX0 411 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 WDTC1Q8N5D0 677 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 OR5D14Q8NGL3 314 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 TRMT2BQ96GJ1 504 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 CWH43Q9H720 699 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 IL23AQ9NPF7 189 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 RDH16O75452 317 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 TAS2R30P59541 319 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 SIM1P81133 766 aaPredicted RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 GPR50Q13585 617 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 OR9A2Q8NGT5 310 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 ASB17Q8WXJ9 295 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 UPRTQ96BW1 309 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 QRSL1Q9H0R6 528 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 THSD1Q9NS62 852 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 DCAF13Q9NV06 445 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 LOC102723532A0A0G2JNH3 316 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 GAAP10253 952 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 HNRNPA2B1P22626 353 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 RAB35Q15286 201 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 ACTBL2Q562R1 376 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 CNIH2Q6PI25 160 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 TPRA1Q86W33 373 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 DCP2Q8IU60 420 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 BRIX1Q8TDN6 353 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 ISG20Q96AZ6 181 aaKnown RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 TGIF2Q9GZN2 237 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 ADAM19Q9H013 955 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 CHRDQ9H2X0 955 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 CDHR4A6H8M9 788 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 MAGEB4O15481 346 aaPredicted RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 SEMA4FO95754 770 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 LCATP04180 440 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 PCBD1P61457 104 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 NNATQ16517 81 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 ZNF648Q5T619 568 aaPredicted RBP12.33□□□□□ -0.44
HLCS-201ENST00000336648 PRAMEF8Q5VWM4 474 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 PRAMEF7Q5VXH5 474 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 SLC15A4Q8N697 577 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 KDM1BQ8NB78 822 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 OR5L1Q8NGL2 311 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 NETO1Q8TDF5 533 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 NICN1Q9BSH3 213 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 RIMBP3CA6NJZ7 1639 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 RIMBP3BA6NNM3 1639 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 RIMBP3Q9UFD9 1639 aa12.33□□□□□ -0.44
HLCS-201ENST00000336648 A0A0J9YY10 115 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 HOXC13P31276 330 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 C4orf17Q53FE4 359 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 CPOQ8IVL8 374 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 INTS14Q96SY0 518 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 INTS6Q9UL03 887 aaKnown RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 RAB40ALP0C0E4 278 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 CA5AP35218 305 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 DLX5P56178 289 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 UBE2KP61086 200 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 PDZD3Q86UT5 571 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 ZFP41Q8N8Y5 198 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 SDSLQ96GA7 329 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 OR51J1Q9H342 316 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 DMRT3Q9NQL9 472 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 SPATA6Q9NWH7 488 aaPredicted RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 SLC7A7Q9UM01 511 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 COL1A1P02452 1464 aaPredicted RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 G3V2L1 256 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 FUT1P19526 365 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 EEF1A1P68104 462 aaKnown RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 BTN1A1Q13410 526 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 AVPI1Q5T686 147 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 NT5C3BQ969T7 300 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 SLAMF9Q96A28 289 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 PCYT2Q99447 389 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 GPR62Q9BZJ7 368 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 SLC19A3Q9BZV2 496 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 CUTCQ9NTM9 273 aa12.32□□□□□ -0.44
HLCS-201ENST00000336648 MCTS1Q9ULC4 181 aaKnown RBP12.32□□□□□ -0.44
HLCS-201ENST00000336648 C2orf78A6NCI8 922 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms