RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 NDUFB5O43674 189 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 NEURL1O76050 574 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 UBTFL6P0CB48 400 aaPredicted RBP19.66■□□□□ 0.74
TPM1-204ENST00000334895 GKN3PP0CG01 181 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 UBL4AP11441 157 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 HOXC5Q00444 222 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 OC90Q02509 493 aaPredicted RBP19.66■□□□□ 0.74
TPM1-204ENST00000334895 SKP2Q13309 424 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 COL28A1Q2UY09 1125 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 PRAMEF20Q5VT98 475 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 PIWIL3Q7Z3Z3 882 aaKnown RBP19.66■□□□□ 0.74
TPM1-204ENST00000334895 ZDHHC21Q8IVQ6 265 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 C10orf67Q8IYJ2 551 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 LILRA2Q8N149 483 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 SIGLEC12Q96PQ1 595 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 KLHDC3Q9BQ90 382 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 UTP23Q9BRU9 249 aaKnown RBP19.66■□□□□ 0.74
TPM1-204ENST00000334895 PRR14Q9BWN1 585 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 METTL7AQ9H8H3 244 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 KLHL28Q9NXS3 571 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 KLRF1Q9NZS2 232 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 LRFN1Q9P244 771 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 SLC13A4Q9UKG4 626 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 SLC9A8Q9Y2E8 581 aa19.66■□□□□ 0.74
TPM1-204ENST00000334895 DIRAS1O95057 198 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 IFNW1P05000 195 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 FABP3P05413 133 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ZNF117Q03924 483 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ZSWIM7Q19AV6 140 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 SLC22A10Q63ZE4 541 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 SPINK14Q6IE38 97 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 PHF10Q8WUB8 498 aaKnown RBP19.65■□□□□ 0.74
TPM1-204ENST00000334895 ARMC7Q9H6L4 198 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 CARD8Q9Y2G2 431 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 H3BNH8 94 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ZNF264O43296 627 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ACAA2P42765 397 aaKnown RBP19.65■□□□□ 0.74
TPM1-204ENST00000334895 RGS8P57771 180 aaPredicted RBP19.65■□□□□ 0.74
TPM1-204ENST00000334895 RIPK1Q13546 671 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 RCN1Q15293 331 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 IGFL2Q6UWQ7 119 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 SNRNP27Q8WVK2 155 aaKnown RBP19.65■□□□□ 0.74
TPM1-204ENST00000334895 ZNF300Q96RE9 604 aaPredicted RBP19.65■□□□□ 0.74
TPM1-204ENST00000334895 OSBPL11Q9BXB4 747 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ANGPTL4Q9BY76 406 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 RNF32Q9H0A6 362 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 NTNG1Q9Y2I2 539 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 ENPP4Q9Y6X5 453 aa19.65■□□□□ 0.74
TPM1-204ENST00000334895 PCNX3Q9H6A9 2034 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 J3KTA2 159 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 CDK2AP1O14519 115 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 FUT4P22083 530 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 CASRP41180 1078 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 YAP1P46937 504 aaKnown RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 CLK3P49761 638 aaKnown RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 RPP38P78345 283 aaKnown RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 SNTA1Q13424 505 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 OR1C1Q15619 314 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 INPP5JQ15735 1006 aaPredicted RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 HMBOX1Q6NT76 420 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 DEF8Q6ZN54 512 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 PSD4Q8NDX1 1056 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 DUSP19Q8WTR2 217 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 LRTOMTQ8WZ04 291 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 SLC35B4Q969S0 331 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 SH3YL1Q96HL8 342 aaPredicted RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 FRMD6Q96NE9 622 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 LAT2Q9GZY6 243 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 EXOSC3Q9NQT5 275 aaKnown RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 CNIH4Q9P003 139 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 NKX1-2Q9UD57 310 aaPredicted RBP19.64■□□□□ 0.73
TPM1-204ENST00000334895 WIF1Q9Y5W5 379 aa19.64■□□□□ 0.73
TPM1-204ENST00000334895 A0A0G2JMM0 328 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 A0A1W2PPB8 328 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 A0A1W2PRS3 328 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 ANKRD33BA6NCL7 494 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 OR5H15A6NDH6 313 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 KIR3DP1A8MWS1 328 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 G3V3Y1 287 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 GTPBP1O00178 669 aaKnown RBP19.63■□□□□ 0.73
TPM1-204ENST00000334895 AP3D1O14617 1153 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 FFAR1O14842 300 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 CYP7B1O75881 506 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 HOXB6P17509 224 aaKnown RBP19.63■□□□□ 0.73
TPM1-204ENST00000334895 HTR2AP28223 471 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 MDS2Q8NDY4 140 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 HAS2Q92819 552 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 ZNF524Q96C55 264 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 SMAD5Q99717 465 aaKnown RBP19.63■□□□□ 0.73
TPM1-204ENST00000334895 PKP2Q99959 881 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 ICAM5Q9UMF0 924 aa19.63■□□□□ 0.73
TPM1-204ENST00000334895 KMT2BQ9UMN6 2715 aaPredicted RBP19.63■□□□□ 0.73
TPM1-204ENST00000334895 CACNA1GO43497 2377 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 HNRNPRO43390 633 aaKnown RBP19.62■□□□□ 0.73
TPM1-204ENST00000334895 HCRTR2O43614 444 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 PRSS23O95084 383 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 EPS8Q12929 822 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 OR5M10Q6IEU7 315 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 SLC30A6Q6NXT4 461 aa19.62■□□□□ 0.73
TPM1-204ENST00000334895 MISPQ8IVT2 679 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms