RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 RFPL3SP0C7P2 107 aa15.08■□□□□ 0
SHOX-201ENST00000334060 TBXA2RP21731 343 aa15.08■□□□□ 0
SHOX-201ENST00000334060 RYKP34925 604 aa15.08■□□□□ 0
SHOX-201ENST00000334060 KCNJ5P48544 419 aa15.08■□□□□ 0
SHOX-201ENST00000334060 KCNJ10P78508 379 aa15.08■□□□□ 0
SHOX-201ENST00000334060 ARG2P78540 354 aa15.08■□□□□ 0
SHOX-201ENST00000334060 BNIP2Q12982 314 aa15.08■□□□□ 0
SHOX-201ENST00000334060 FGFBP1Q14512 234 aa15.08■□□□□ 0
SHOX-201ENST00000334060 RCN1Q15293 331 aa15.08■□□□□ 0
SHOX-201ENST00000334060 LIN52Q52LA3 116 aa15.08■□□□□ 0
SHOX-201ENST00000334060 PCSK4Q6UW60 755 aa15.08■□□□□ 0
SHOX-201ENST00000334060 SPATA24Q86W54 205 aa15.08■□□□□ 0
SHOX-201ENST00000334060 EXD3Q8N9H8 876 aa15.08■□□□□ 0
SHOX-201ENST00000334060 WDSUB1Q8N9V3 476 aa15.08■□□□□ 0
SHOX-201ENST00000334060 PHOSPHO1Q8TCT1 267 aa15.08■□□□□ 0
SHOX-201ENST00000334060 UTP23Q9BRU9 249 aaKnown RBP15.08■□□□□ 0
SHOX-201ENST00000334060 PRORYQ9H606 182 aa15.08■□□□□ 0
SHOX-201ENST00000334060 UBQLN4Q9NRR5 601 aa15.08■□□□□ 0
SHOX-201ENST00000334060 THUMPD1Q9NXG2 353 aaKnown RBP15.08■□□□□ 0
SHOX-201ENST00000334060 DNAJB12Q9NXW2 375 aaKnown RBP15.08■□□□□ 0
SHOX-201ENST00000334060 KLRF1Q9NZS2 232 aa15.08■□□□□ 0
SHOX-201ENST00000334060 MED11Q9P086 117 aa15.08■□□□□ 0
SHOX-201ENST00000334060 ZFYVE26Q68DK2 2539 aa15.08■□□□□ 0
SHOX-201ENST00000334060 OR5H15A6NDH6 313 aa15.07■□□□□ 0
SHOX-201ENST00000334060 TMEM247A6NEH6 219 aa15.07■□□□□ 0
SHOX-201ENST00000334060 SERINC4A6NH21 518 aa15.07■□□□□ 0
SHOX-201ENST00000334060 hCG_2039718K7EN88 272 aa15.07■□□□□ 0
SHOX-201ENST00000334060 ZNHIT1O43257 154 aa15.07■□□□□ 0
SHOX-201ENST00000334060 NID1P14543 1247 aa15.07■□□□□ 0
SHOX-201ENST00000334060 ETS2P15036 469 aa15.07■□□□□ 0
SHOX-201ENST00000334060 MST1P26927 711 aa15.07■□□□□ 0
SHOX-201ENST00000334060 VLDLRP98155 873 aa15.07■□□□□ 0
SHOX-201ENST00000334060 IRAK1BP1Q5VVH5 260 aa15.07■□□□□ 0
SHOX-201ENST00000334060 GALNTL5Q7Z4T8 443 aa15.07■□□□□ 0
SHOX-201ENST00000334060 ADGRG5Q8IZF4 528 aa15.07■□□□□ 0
SHOX-201ENST00000334060 OR6T1Q8NGN1 323 aa15.07■□□□□ 0
SHOX-201ENST00000334060 PYDC1Q8WXC3 89 aa15.07■□□□□ 0
SHOX-201ENST00000334060 JSRP1Q96MG2 331 aaPredicted RBP15.07■□□□□ 0
SHOX-201ENST00000334060 METTL7AQ9H8H3 244 aa15.07■□□□□ 0
SHOX-201ENST00000334060 DTNAQ9Y4J8 743 aa15.07■□□□□ 0
SHOX-201ENST00000334060 RELNP78509 3460 aa15.07■□□□□ 0
SHOX-201ENST00000334060 CDHR4A6H8M9 788 aa15.07■□□□□ 0
SHOX-201ENST00000334060 LYNP07948 512 aa15.07■□□□□ 0
SHOX-201ENST00000334060 HTR2AP28223 471 aa15.07■□□□□ 0
SHOX-201ENST00000334060 PPP1R8Q12972 351 aaKnown RBP15.07■□□□□ 0
SHOX-201ENST00000334060 IQCCQ4KMZ1 466 aa15.07■□□□□ 0
SHOX-201ENST00000334060 AAGABQ6PD74 315 aa15.07■□□□□ 0
SHOX-201ENST00000334060 IGFL2Q6UWQ7 119 aa15.07■□□□□ 0
SHOX-201ENST00000334060 NUP54Q7Z3B4 507 aa15.07■□□□□ 0
SHOX-201ENST00000334060 PEX5LQ8IYB4 626 aa15.07■□□□□ 0
SHOX-201ENST00000334060 SLC15A4Q8N697 577 aa15.07■□□□□ 0
SHOX-201ENST00000334060 RBMXL3Q8N7X1 1067 aaKnown RBP15.07■□□□□ 0
SHOX-201ENST00000334060 GNRHR2Q96P88 292 aa15.07■□□□□ 0
SHOX-201ENST00000334060 TEKT2Q9UIF3 430 aa15.07■□□□□ 0
SHOX-201ENST00000334060 ABCG2Q9UNQ0 655 aa15.07■□□□□ 0
SHOX-201ENST00000334060 LRRC3CA6NJW4 275 aa15.06■□□□□ 0
SHOX-201ENST00000334060 ALG1L2C9J202 215 aa15.06■□□□□ 0
SHOX-201ENST00000334060 CDC40O60508 579 aaKnown RBP eCLIP15.06■□□□□ 0
SHOX-201ENST00000334060 FKBP6O75344 327 aa15.06■□□□□ 0
SHOX-201ENST00000334060 SEMG1P04279 462 aa15.06■□□□□ 0
SHOX-201ENST00000334060 TNFSF10P50591 281 aa15.06■□□□□ 0
SHOX-201ENST00000334060 ZNF136P52737 540 aa15.06■□□□□ 0
SHOX-201ENST00000334060 SELENOWP63302 87 aa15.06■□□□□ 0
SHOX-201ENST00000334060 LSM11P83369 360 aaKnown RBP eCLIP15.06■□□□□ 0
SHOX-201ENST00000334060 SKP2Q13309 424 aa15.06■□□□□ 0
SHOX-201ENST00000334060 CNPY1Q3B7I2 92 aa15.06■□□□□ 0
SHOX-201ENST00000334060 RNFT1Q5M7Z0 435 aa15.06■□□□□ 0
SHOX-201ENST00000334060 ARSKQ6UWY0 536 aa15.06■□□□□ 0
SHOX-201ENST00000334060 EIF3MQ7L2H7 374 aaKnown RBP15.06■□□□□ 0
SHOX-201ENST00000334060 PATL1Q86TB9 770 aaKnown RBP15.06■□□□□ 0
SHOX-201ENST00000334060 SULF2Q8IWU5 870 aa15.06■□□□□ 0
SHOX-201ENST00000334060 SLC26A7Q8TE54 656 aa15.06■□□□□ 0
SHOX-201ENST00000334060 TTC9Q92623 222 aa15.06■□□□□ 0
SHOX-201ENST00000334060 NTNG2Q96CW9 530 aa15.06■□□□□ 0
SHOX-201ENST00000334060 OSBPL11Q9BXB4 747 aa15.06■□□□□ 0
SHOX-201ENST00000334060 TBL1XR1Q9BZK7 514 aa15.06■□□□□ 0
SHOX-201ENST00000334060 AMBRA1Q9C0C7 1298 aa15.06■□□□□ 0
SHOX-201ENST00000334060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.06■□□□□ 0
SHOX-201ENST00000334060 TRIM45Q9H8W5 580 aaPredicted RBP15.06■□□□□ 0
SHOX-201ENST00000334060 TUBA8Q9NY65 449 aaPredicted RBP15.06■□□□□ 0
SHOX-201ENST00000334060 RHCGQ9UBD6 479 aa15.06■□□□□ 0
SHOX-201ENST00000334060 AP3M1Q9Y2T2 418 aa15.06■□□□□ 0
SHOX-201ENST00000334060 IGSF10Q6WRI0 2623 aa15.06■□□□□ 0
SHOX-201ENST00000334060 TCRBV3S1A0A5B6 114 aa15.05■□□□□ 0
SHOX-201ENST00000334060 SCDO00767 359 aa15.05■□□□□ 0
SHOX-201ENST00000334060 NDUFB5O43674 189 aa15.05■□□□□ 0
SHOX-201ENST00000334060 CSTAP01040 98 aa15.05■□□□□ 0
SHOX-201ENST00000334060 THY1P04216 161 aa15.05■□□□□ 0
SHOX-201ENST00000334060 CELA3AP09093 270 aa15.05■□□□□ 0
SHOX-201ENST00000334060 NAGAP17050 411 aa15.05■□□□□ 0
SHOX-201ENST00000334060 UCNP55089 124 aa15.05■□□□□ 0
SHOX-201ENST00000334060 ACTR3P61158 418 aa15.05■□□□□ 0
SHOX-201ENST00000334060 AP2B1P63010 937 aa15.05■□□□□ 0
SHOX-201ENST00000334060 TXNL4AP83876 142 aaKnown RBP15.05■□□□□ 0
SHOX-201ENST00000334060 LY6DQ14210 128 aa15.05■□□□□ 0
SHOX-201ENST00000334060 NADK2Q4G0N4 442 aa15.05■□□□□ 0
SHOX-201ENST00000334060 SLC22A10Q63ZE4 541 aa15.05■□□□□ 0
SHOX-201ENST00000334060 RTL4Q6ZR62 310 aa15.05■□□□□ 0
SHOX-201ENST00000334060 OR5M1Q8NGP8 315 aa15.05■□□□□ 0
SHOX-201ENST00000334060 HAS2Q92819 552 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms