RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 SLC35C2Q9NQQ7 365 aa10.38□□□□□ -0.75
SMIM4-201ENST00000307106 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
SMIM4-201ENST00000307106 CPSF2Q9P2I0 782 aaKnown RBP10.38□□□□□ -0.75
SMIM4-201ENST00000307106 ING1Q9UK53 422 aaPredicted RBP10.38□□□□□ -0.75
SMIM4-201ENST00000307106 A0A087WV62 115 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 CIB4A0PJX0 185 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 GJE1A6NN92 205 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 ALG1L2C9J202 215 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 C9JVG2 144 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 E7ESA3 106 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 RGS14O43566 566 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 PDYNP01213 254 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 IGKV1D-16P01601 117 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 PCMT1P22061 227 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 CRABP2P29373 138 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 SPRP35270 261 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 DVL1P1P54792 670 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 CDH15P55291 814 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 SNRPD2P62316 118 aaKnown RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 TRAF3Q13114 568 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 MLC1Q15049 377 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 ZSWIM7Q19AV6 140 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 SWI5Q1ZZU3 235 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 MST1LQ2TV78 715 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 METTL2BQ6P1Q9 378 aaKnown RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 PEG10Q86TG7 708 aaKnown RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 SELENOMQ8WWX9 145 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 HPS1Q92902 700 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 ZNF775Q96BV0 537 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 SH3YL1Q96HL8 342 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 ZNF300Q96RE9 604 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 VRK1Q99986 396 aaPredicted RBP10.37□□□□□ -0.75
SMIM4-201ENST00000307106 KLHDC3Q9BQ90 382 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 C1QTNF6Q9BXI9 259 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 COQ10BQ9H8M1 238 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 BRF2Q9HAW0 419 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 C3orf14Q9HBI5 128 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 NTMQ9P121 344 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 TRAF6Q9Y4K3 522 aa10.37□□□□□ -0.75
SMIM4-201ENST00000307106 GXYLT2A0PJZ3 443 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 LILRA1O75019 489 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 KCNH1O95259 989 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PSMG1O95456 288 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 TACSTD2P09758 323 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 LINGO3P0C6S8 592 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 ELK4P28324 431 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 GABRA3P34903 492 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 EIF1P41567 113 aaKnown RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 RASGEF1BQ0VAM2 473 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 FOXF1Q12946 379 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 TMEM176BQ3YBM2 270 aaPredicted RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 GGTA1PQ4G0N0 100 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 TMEM107Q6UX40 140 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 SLC46A3Q7Z3Q1 461 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 ZNF100Q8IYN0 542 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 CENPLQ8N0S6 344 aaPredicted RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PLD6Q8N2A8 252 aaKnown RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 SPC24Q8NBT2 197 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 OR4F6Q8NGB9 312 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 OR4C3Q8NH37 302 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 ACTRT1Q8TDG2 376 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 ZFP90Q8TF47 636 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PIK3R3Q92569 461 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 SNX18Q96RF0 628 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 BBS4Q96RK4 519 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 LMF2Q9BU23 707 aaKnown RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 DDX18Q9NVP1 670 aaKnown RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 NMRK1Q9NWW6 199 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 MCM8Q9UJA3 840 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PCDHB10Q9UN67 800 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 C19orf53Q9UNZ5 99 aaPredicted RBP10.36□□□□□ -0.75
SMIM4-201ENST00000307106 PCDHGB1Q9Y5G3 927 aa10.36□□□□□ -0.75
SMIM4-201ENST00000307106 WNK2Q9Y3S1 2297 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 TCRBV9S1A1TA0A576 114 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 CCT8L1PA6NM43 557 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 ATP6V1G2-DDX39BF2Z307 99 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 UPK1AO00322 258 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 EFNA2O43921 213 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 PCDH7O60245 1069 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 SLITRK5O94991 958 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 STAMBPO95630 424 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 IGHV3-9P01782 118 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 JUNP05412 331 aaKnown RBP10.35□□□□□ -0.75
SMIM4-201ENST00000307106 GIFP27352 417 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 NCBP2P52298 156 aaKnown RBP eCLIP10.35□□□□□ -0.75
SMIM4-201ENST00000307106 HILS1P60008 231 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 SLC29A2Q14542 456 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 HEPACAMQ14CZ8 416 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 FAM83EQ2M2I3 478 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 GLE1Q53GS7 698 aaKnown RBP10.35□□□□□ -0.75
SMIM4-201ENST00000307106 GRTP1Q5TC63 336 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 SHISA2Q6UWI4 295 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 UGT2A3Q6UWM9 527 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 TREML4Q6UXN2 200 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 CTAGE3PQ8IX95 158 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 UBE2J2Q8N2K1 259 aa10.35□□□□□ -0.75
SMIM4-201ENST00000307106 PTGR2Q8N8N7 351 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms