RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DNAJC13O75165 2243 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 KIAA0513O60268 411 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ACTL6BO94805 426 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 SLCO2B1O94956 709 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 LHCGRP22888 699 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 MSX1P28360 303 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ERVK-25P63136 954 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 MAB21L1Q13394 359 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 RAB11BQ15907 218 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 C3orf38Q5JPI3 329 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 RCBTB1Q8NDN9 531 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 AKAP1Q92667 903 aaKnown RBP eCLIP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 SLC6A7Q99884 636 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 MS4A8Q9BY19 250 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 COPZ2Q9P299 210 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM181Q9P2C4 612 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 CAMK2AQ9UQM7 478 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 NHSL1Q5SYE7 1610 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 CLCA1A8K7I4 914 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 INMT-MINDY4F8WBC2 141 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 M0R129 80 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 CSF2P04141 144 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 SSR4P51571 173 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 CHRNEQ04844 493 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 EIF2B1Q14232 305 aaKnown RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM151AQ8N4L1 468 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ZNF709Q8N972 641 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 SLC2A12Q8TD20 617 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 NECAB3Q96P71 396 aaPredicted RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ABCG2Q9UNQ0 655 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 RBMX2Q9Y388 322 aaKnown RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 GNAO1P09471 354 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 RAB3BP20337 219 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 CDNFQ49AH0 187 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 RNASE10Q5GAN6 216 aaKnown RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 GPR139Q6DWJ6 353 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 L3MBTL4Q8NA19 623 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 POGLUT1Q8NBL1 392 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 ULBP2Q9BZM5 246 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 FOXQ1Q9C009 403 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 KIR3DX1Q9H7L2 352 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 MOV10Q9HCE1 1003 aaKnown RBP17.36■□□□□ 0.37
PCDH1-201ENST00000287008 STUB1Q9UNE7 303 aa17.36■□□□□ 0.37
PCDH1-201ENST00000287008 PLSCR5A0PG75 271 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 OR6C70A6NIJ9 312 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 TACR1P25103 407 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 DMWDQ09019 674 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 FCRLBQ6BAA4 426 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 SDR9C7Q8NEX9 313 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 MEPEQ9NQ76 525 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 GPR160Q9UJ42 338 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 CNOT11Q9UKZ1 510 aaKnown RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ADAM18Q9Y3Q7 739 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 MMACHCQ9Y4U1 282 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ZDHHC11BP0C7U3 371 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 CFL1P23528 166 aaKnown RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 CD97P48960 835 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 PROX2Q3B8N5 592 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 XKRXQ6PP77 449 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 FAM111BQ6SJ93 734 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 SBSNQ6UWP8 590 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 BAIAP2L2Q6UXY1 529 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 LILRA3Q8N6C8 439 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 GRPEL2Q8TAA5 225 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 TREX2Q9BQ50 279 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ART1P52961 327 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 GABARAPL2P60520 117 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 REEP5Q00765 189 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 HENMT1Q5T8I9 393 aaKnown RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 OGFRL1Q5TC84 451 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 PRAMEF20Q5VT98 475 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 UGT2A3Q6UWM9 527 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 SLC22A16Q86VW1 577 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 INTS14Q96SY0 518 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ATP13A2Q9NQ11 1180 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ALG5Q9Y673 324 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 GLULP15104 373 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 IL32P24001 234 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 PSMA6P60900 246 aaKnown RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 CD83Q01151 205 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 POU3F1Q03052 451 aaPredicted RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 NKAIN2Q5VXU1 208 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 DCDC5Q6ZRR9 648 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ISOC1Q96CN7 298 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 MUCL1Q96DR8 90 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 ACTR6Q9GZN1 396 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 C12orf4Q9NQ89 552 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 TM7SF3Q9NS93 570 aa17.35■□□□□ 0.37
PCDH1-201ENST00000287008 TMA7Q9Y2S6 64 aaKnown RBP17.35■□□□□ 0.37
PCDH1-201ENST00000287008 LOC102725191A0A1B0GVB3 256 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 EEF1E1O43324 174 aaKnown RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 MRPL33O75394 65 aaKnown RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 ARAFP10398 606 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 TMEM176BQ3YBM2 270 aaPredicted RBP17.34■□□□□ 0.37
PCDH1-201ENST00000287008 PRSS48Q7RTY5 328 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 VRK2Q86Y07 508 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 GPR148Q8TDV2 347 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 SLC30A3Q99726 388 aa17.34■□□□□ 0.37
PCDH1-201ENST00000287008 OR52D1Q9H346 318 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms