RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CREB3L1Q96BA8 519 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 MSANTD3Q96H12 275 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC35G5Q96KT7 338 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 MCUBQ9NWR8 336 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 KCNE3Q9Y6H6 103 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 SPTBP11277 2137 aa17.04■□□□□ 0.32
PDLIM3-201ENST00000284767 M0R3H8 397 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC35G6P0C7Q6 338 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 RGS1Q08116 209 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 LAMTOR1Q6IAA8 161 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC27A4Q6P1M0 643 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 ELMOD2Q8IZ81 293 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 ARIH2OSQ8N7S6 290 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 OR5H6Q8NGV6 325 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 TEX47Q8TBZ9 253 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 AKAP1Q92667 903 aaKnown RBP eCLIP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 KAT2AQ92830 837 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 GAL3ST3Q96A11 431 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 PRRC1Q96M27 445 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 EQTNQ9NQ60 294 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 GPR27Q9NS67 375 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 POT1Q9NUX5 634 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 MALT1Q9UDY8 824 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 PILRAQ9UKJ1 303 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 VPS13AQ96RL7 3174 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 KDM4EB2RXH2 506 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 LRRTM2O43300 516 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 ICMTO60725 284 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC19A2O60779 497 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 HLA-DPB1P04440 258 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 HMGN2P05204 90 aaKnown RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 MC3RP41968 323 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 MAZP56270 477 aaKnown RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SIM1P81133 766 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 HHEXQ03014 270 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 MRPL28Q13084 256 aaKnown RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 RUNX2Q13950 521 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 DEFB110Q30KQ9 67 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 TRILQ7L0X0 811 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 COMTD1Q86VU5 262 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 CCDC28AQ8IWP9 274 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SRFBP1Q8NEF9 429 aaKnown RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC9A6Q92581 669 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 HLA-CQ95604 372 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 TM4SF19Q96DZ7 209 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 ZNF764Q96H86 408 aaPredicted RBP17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 HYLS1Q96M11 299 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 SLC38A2Q96QD8 506 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 GPA33Q99795 319 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 TWSG1Q9GZX9 223 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 CLCA2Q9UQC9 943 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 POLHQ9Y253 713 aa17.03■□□□□ 0.32
PDLIM3-201ENST00000284767 CHURC1-FNTBB4DL54 471 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 H0YGG7 62 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 TPD52L2O43399 206 aaKnown RBP17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 AKR7A2O43488 359 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 TNFSF14O43557 240 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 APOL3O95236 402 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 PPP2R1BP30154 601 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 ARF3P61204 181 aaPredicted RBP17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 ID2Q02363 134 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 DSG2Q14126 1118 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 MLC1Q15049 377 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 PARGQ86W56 976 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 LSRQ86X29 649 aaPredicted RBP17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 KIF18BQ86Y91 864 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 ANKK1Q8NFD2 765 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 OR4M1Q8NGD0 313 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 COL26A1Q96A83 441 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 SPATA5L1Q9BVQ7 753 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 PLA2G12AQ9BZM1 189 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 SAP130Q9H0E3 1048 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 ENTPD4Q9Y227 616 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 HSPB11Q9Y547 144 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 CDH10Q9Y6N8 788 aa17.02■□□□□ 0.32
PDLIM3-201ENST00000284767 C12orf71A8MTZ7 269 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 CHST10O43529 356 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 SLC1A3P43003 542 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 ACSM1Q08AH1 577 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 BICRALQ6AI39 1079 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 ZDHHC1Q8WTX9 485 aa17.02■□□□□ 0.31
PDLIM3-201ENST00000284767 C2orf74A8MZ97 194 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 INMT-MINDY4F8WBC2 141 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 NOS1APO75052 506 aaPredicted RBP17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 UBXN7O94888 489 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 BTG1P62324 171 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 ANGPT1Q15389 498 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 PRICKLE2Q7Z3G6 844 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 POGLUT1Q8NBL1 392 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 OR5T3Q8NGG3 340 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 NEIL3Q8TAT5 605 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 NT5CQ8TCD5 201 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 ZNF681Q96N22 645 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 ZFYVE21Q9BQ24 234 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 QRSL1Q9H0R6 528 aaKnown RBP17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 FAM60AQ9NP50 221 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 AKAP8O43823 692 aaKnown RBP17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 NR2F1P10589 423 aa17.01■□□□□ 0.31
PDLIM3-201ENST00000284767 CSNK2A2P19784 350 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms