RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 NTRK2Q16620 822 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 SMN1Q16637 294 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 GXYLT1Q4G148 440 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 BCL2L15Q5TBC7 163 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 C18orf63Q68DL7 685 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 SPRED1Q7Z699 444 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 GSKIPQ9P0R6 139 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 PTRH2Q9Y3E5 179 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 TRAV27A0A087WT01 109 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 PRRT4C9JH25 899 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 PLATP00750 562 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 CFL1P23528 166 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 CRABP1P29762 137 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 EIF2DP41214 584 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 FOLR3P41439 243 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 RAB38P57729 211 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 NKX3-2P78367 333 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 CSNK1G2P78368 415 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 CBFBQ13951 182 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 TMPPEQ6ZT21 453 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 ZNF595Q8IYB9 648 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 OR5W2Q8NH69 310 aa13.11□□□□□ -0.31
CDH3-201ENST00000264012 HOXB13Q92826 284 aaPredicted RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 NUFIP1Q9UHK0 495 aaKnown RBP13.11□□□□□ -0.31
CDH3-201ENST00000264012 TRBV4-1A0A0J9YWV2 114 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 ZSCAN5BA6NJL1 495 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 FAM183AA6NL82 134 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 EGFP01133 1207 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 GRK5P34947 590 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 MAT1AQ00266 395 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 RAB11BQ15907 218 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 PGGHGQ32M88 737 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 C11orf91Q3C1V1 193 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CHRFAM7AQ494W8 412 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 MRPL2Q5T653 305 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 Q6ZPB1 254 aaPredicted RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 PTRH1Q86Y79 214 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 STX12Q86Y82 276 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CHTF18Q8WVB6 975 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 TM4SF18Q96CE8 201 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 NEDD4LQ96PU5 975 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 RPH3AQ9Y2J0 694 aaPredicted RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 ATXN7L3Q14CW9 347 aaPredicted RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 ADIPOR2Q86V24 386 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 SPRYD4Q8WW59 207 aaPredicted RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 CACNG6Q9BXT2 260 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 QRSL1Q9H0R6 528 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 FBXL3Q9UKT7 428 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CDC14CA4D256 554 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 RAD51DO75771 328 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 TFAP2AP05549 437 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CHMP24386 653 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 POU3F4P49335 361 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 MBNL1Q9NR56 388 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 A0A1B0GVG6 124 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 SNAPC5O75971 98 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 GYPBP06028 91 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CA5AP35218 305 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 PTGS2P35354 604 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 RBMXP38159 391 aaKnown RBP13.1□□□□□ -0.31
CDH3-201ENST00000264012 SELENOVP59797 346 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 METRNLQ641Q3 311 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 OR51Q1Q8NH59 317 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 TMEM163Q8TC26 289 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 GAB3Q8WWW8 586 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 CD300AQ9UGN4 299 aa13.1□□□□□ -0.31
CDH3-201ENST00000264012 GJE1A6NN92 205 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CHP2O43745 196 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CAPNS1P04632 268 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CD3GP09693 182 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 UGT2B10P36537 528 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 DUSP6Q16828 381 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 HES5Q5TA89 166 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 OLIG1Q8TAK6 271 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 MYADMQ96S97 322 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 FGF22Q9HCT0 170 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 PLEKHM1Q9Y4G2 1056 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 RREB1Q92766 1687 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 PRKRAO75569 313 aaKnown RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 H2AFB2P0C5Z0 115 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CD40LGP29965 261 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 CAPZA1P52907 286 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 LTB4RQ15722 352 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 PPP1R3BQ86XI6 285 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 GGHQ92820 318 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 SLC6A7Q99884 636 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ACTR6Q9GZN1 396 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 TESQ9UGI8 421 aaKnown RBP13.09□□□□□ -0.31
CDH3-201ENST00000264012 A6NIZ1 184 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 ATE1O95260 518 aa13.09□□□□□ -0.31
CDH3-201ENST00000264012 S100A6P06703 90 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms