RNA–Protein interactions for RNA: ENST00000254941.6

NIP7-202, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 1 (best) BASIC

Gene NIP7, Length 1,887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-202ENST00000254941 TRAM2Q15035 370 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 PDK3Q15120 406 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 BTBD16Q32M84 506 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 PODNL1Q6PEZ8 512 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 APOOLQ6UXV4 268 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 PLEKHM3Q6ZWE6 761 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 USP51Q70EK9 711 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 NDUFAF7Q7L592 441 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 ZNF550Q7Z398 422 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 GALNT5Q7Z7M9 940 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 LINC00471Q8N535 108 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 TOR1AIP2Q8NFQ8 470 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 THAP3Q8WTV1 239 aaPredicted RBP8.69□□□□□ -1.02
NIP7-202ENST00000254941 ZNF559Q9BR84 538 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 POLR1BQ9H9Y6 1135 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 MMP25Q9NPA2 562 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 UBAP1Q9NZ09 502 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 MYOTQ9UBF9 498 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 NTNG1Q9Y2I2 539 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 NPFFR2Q9Y5X5 522 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 ASPMQ8IZT6 3477 aa8.69□□□□□ -1.02
NIP7-202ENST00000254941 A0A1W2PQD3 144 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 TRAPPC13A5PLN9 417 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 SLC16A6O15403 523 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZNF354AO60765 605 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 MITFO75030 526 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 UGT2B11O75310 529 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PPM1BO75688 479 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 GASTP01350 101 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 UBTFL6P0CB48 400 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 ITGAMP11215 1152 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NAGAP17050 411 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 MYF6P23409 242 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NOVA1P51513 510 aaKnown RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 GABREP78334 506 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 FOXD4Q12950 439 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 DNASE1L3Q13609 305 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 OR1Q1Q15612 314 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 TTC23Q5W5X9 447 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 DESI1Q6ICB0 168 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZNF613Q6PF04 617 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 UGT2A3Q6UWM9 527 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 C16orf47Q6ZP98 133 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 GDF7Q7Z4P5 450 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PPP1R32Q7Z5V6 425 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZNF440Q8IYI8 595 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 GALNT15Q8N3T1 639 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 LSMEM1Q8N8F7 131 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 AQP11Q8NBQ7 271 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 M1APQ8TC57 530 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ADAMTS14Q8WXS8 1223 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 GATA6Q92908 595 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 SLC38A4Q969I6 547 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 SLC41A3Q96GZ6 507 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NIPSNAP1Q9BPW8 284 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 GRIP2Q9C0E4 1043 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZNF556Q9HAH1 456 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PAPOLBQ9NRJ5 636 aaKnown RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 POFUT2Q9Y2G5 429 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PCDHGB5Q9Y5G0 923 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PCSK5Q92824 1860 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 MED13Q9UHV7 2174 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 A0A087WUU8 490 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NSG1A0A0A6YYJ2 146 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 LOC100130705A0A1B0GUX0 176 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 CDRT15L2A8MXV6 281 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ALG1L2C9J202 215 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 H3BNH8 94 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 WWP2O00308 870 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 OR10H3O60404 316 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 RAD1O60671 282 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NADKO95544 446 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 CLIC3O95833 236 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ADAP00813 363 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 UBL4AP11441 157 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 F8A1P23610 371 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 CD82P27701 267 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 POLR2IP36954 125 aaKnown RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 DLSTP36957 453 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NHLH1Q02575 133 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 NPRL3Q12980 569 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 CD226Q15762 336 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 MARCH9Q86YJ5 346 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PARP8Q8N3A8 854 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 POGLUT1Q8NBL1 392 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZNF555Q8NEP9 628 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 OR4K5Q8NGD3 323 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PHOSPHO1Q8TCT1 267 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ACOT11Q8WXI4 607 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 DGCR6LQ9BY27 220 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 GABARAPL3Q9BY60 117 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 DEFB126Q9BYW3 111 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 TRIM2Q9C040 744 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 ZBTB20Q9HC78 741 aaPredicted RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 EXOSC3Q9NQT5 275 aaKnown RBP8.68□□□□□ -1.02
NIP7-202ENST00000254941 SLC7A7Q9UM01 511 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 MGAT4BQ9UQ53 548 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 PCDHGA6Q9Y5G7 932 aa8.68□□□□□ -1.02
NIP7-202ENST00000254941 E9PQ18 207 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms