RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 TRIM2Q9C040 744 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 BATF3Q9NR55 127 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 SELENONQ9NZV5 590 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 CNOT1A5YKK6 2376 aaKnown RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 PMS2P1A4D2B8 440 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 C9orf172C9J069 976 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 DLGAP3O95886 979 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 UMODP07911 640 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 RAB40ALP0C0E4 278 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ADH7P40394 386 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 COPZ1P61923 177 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ESRRGP62508 458 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 RPS15P62841 145 aaKnown RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 IL5RAQ01344 420 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 COX10Q12887 443 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 BLMHQ13867 455 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 RSPO4Q2I0M5 234 aaPredicted RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 BTBD16Q32M84 506 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 FAM69BQ5VUD6 431 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 PGBD2Q6P3X8 592 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ZNF613Q6PF04 617 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ESX1Q8N693 406 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 PIGXQ8TBF5 258 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 THAP3Q8WTV1 239 aaPredicted RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ACOT11Q8WXI4 607 aaPredicted RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ZNF696Q9H7X3 374 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 LIN28AQ9H9Z2 209 aaKnown RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 ZNF223Q9UK11 482 aaPredicted RBP17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 HSPE1-MOB4S4R3N1 261 aa17.23■□□□□ 0.35
TNFSF9-201ENST00000245817 SPEGQ15772 3267 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 A0A087WUU8 490 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 TSPAN2O60636 221 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 ICOSLGO75144 302 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 BCAS1O75363 584 aaPredicted RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 FTH1P19P0C7X4 201 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 UBL4AP11441 157 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 CEACAM1P13688 526 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 ENDOUP21128 410 aaKnown RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 GSTM3P21266 225 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 HTR2AP28223 471 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 RYKP34925 604 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 CLK3P49761 638 aaKnown RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 EXT1Q16394 746 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 KLHL17Q6TDP4 642 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 GNPDA2Q8TDQ7 276 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 YTHDF1Q9BYJ9 559 aaKnown RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 DEFB126Q9BYW3 111 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 TBL1XR1Q9BZK7 514 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 ZBTB20Q9HC78 741 aaPredicted RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 NDRG4Q9ULP0 352 aaKnown RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 NPFFR2Q9Y5X5 522 aa17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 COL27A1Q8IZC6 1860 aaPredicted RBP17.22■□□□□ 0.35
TNFSF9-201ENST00000245817 IGHV1-45A0A0A0MS14 117 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 OSMP13725 252 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 MMP11P24347 488 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 RAPSNQ13702 412 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 EFR3AQ14156 821 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 PCOLCEQ15113 449 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 C1orf94Q6P1W5 598 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 NKAIN4Q8IVV8 208 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 APLFQ8IW19 511 aaPredicted RBP17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 GATSQ8NAP1 163 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 HRASLS5Q96KN8 279 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 ZNF700Q9H0M5 742 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 FLRT3Q9NZU0 649 aa17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 FARSAQ9Y285 508 aaKnown RBP17.21■□□□□ 0.35
TNFSF9-201ENST00000245817 OR6C70A6NIJ9 312 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 WWP2O00308 870 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TNFSF15O95150 251 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 POU1F1P28069 291 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 ACAA2P42765 397 aaKnown RBP17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 MBOAT2Q6ZWT7 520 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TIPARPQ7Z3E1 657 aaKnown RBP17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 ZER1Q7Z7L7 766 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 CADM2Q8N3J6 435 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TMCO5AQ8N6Q1 288 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 GRHL3Q8TE85 626 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 CT55Q8WUE5 264 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 FOXJ2Q9P0K8 574 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TCFL5Q9UL49 500 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 PCDHGA6Q9Y5G7 932 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 H3BN98 237 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 ZNF264O43296 627 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NDUFB5O43674 189 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 PPM1BO75688 479 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NGFRP08138 427 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 LINGO3P0C6S8 592 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 CRISP1P54107 249 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NUP107P57740 925 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 ALDH6A1Q02252 535 aaKnown RBP17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 PLAURQ03405 335 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 CDK20Q8IZL9 346 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 RNF113BQ8IZP6 322 aaKnown RBP17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NLGN4XQ8N0W4 816 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 LSMEM1Q8N8F7 131 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 NLGN4YQ8NFZ3 816 aaPredicted RBP17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 SLC22A8Q8TCC7 542 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TMEM255BQ8WV15 326 aa17.2■□□□□ 0.34
TNFSF9-201ENST00000245817 TMCO6Q96DC7 493 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms