RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 SOX30O94993 753 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RAB36O95755 333 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 AGR2O95994 175 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ELK1P19419 428 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RBMS1P29558 406 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 HOXC13P31276 330 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 S100A11P31949 105 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RFC3P40938 356 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 CD86P42081 329 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PITPNBP48739 271 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 MAZP56270 477 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 CAV3P56539 151 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 DAOAP59103 153 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 KIAA1024LP59773 190 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 DEFA5Q01523 94 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 STX4Q12846 297 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PLD1Q13393 1074 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ILKQ13418 452 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PUM1Q14671 1186 aaKnown RBP eCLIP5.5□□□□□ -1.53
CASC19-260ENST00000641828 IFI44LQ53G44 452 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZRANB3Q5FWF4 1079 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 METTL11BQ5VVY1 283 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SLC25A25Q6KCM7 469 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 EFCAB12Q6NXP0 572 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 CASP12Q6UXS9 341 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 TMEM91Q6ZNR0 172 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 BTN2A1Q7KYR7 527 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ASCL5Q7RTU5 278 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 TRMT11Q7Z4G4 463 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 TSEN54Q7Z6J9 526 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 METTL23Q86XA0 190 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 OR8J1Q8NGP2 316 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 OR5M3Q8NGP4 307 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 OR52J3Q8NH60 311 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 OR1S1Q8NH92 325 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RPLP0P6Q8NHW5 317 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 NANPQ8TBE9 248 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ELP5Q8TE02 316 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 EEF1AKMT1Q8WVE0 214 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PANX1Q96RD7 426 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 IL4I1Q96RQ9 567 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 TREX2Q9BQ50 279 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 CACNG6Q9BXT2 260 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SPRTNQ9H040 489 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 OR51M1Q9H341 326 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZNF768Q9H5H4 540 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 CDCP1Q9H5V8 836 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RERGLQ9H628 205 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 CYSLTR2Q9NS75 346 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 TMEM140Q9NV12 185 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 IMP3Q9NV31 184 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZNF624Q9P2J8 865 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 EXTL2Q9UBQ6 330 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 UBQLN1Q9UMX0 589 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 KCTD3Q9Y597 815 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SNX10Q9Y5X0 201 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 CKAP5Q14008 2032 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 COL4A6Q14031 1691 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 DSPPQ9NZW4 1301 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 KMT2BQ9UMN6 2715 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 TMEM129A0AVI4 362 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 HMSDA8MTL9 139 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PRRT4C9JH25 899 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 MCRIP1C9JLW8 97 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 F2RL2O00254 374 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SMAD6O43541 496 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 HCRTO43612 131 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 LANCL1O43813 399 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 EIF3GO75821 320 aaKnown RBP eCLIP5.5□□□□□ -1.53
CASC19-260ENST00000641828 TOXO94900 526 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 KDM4BO94953 1096 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 HPP00738 406 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 HLA-DPB1P04440 258 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 EBLN1P0CF75 366 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 POU2F1P14859 743 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 IL9P15248 144 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZNF3P17036 446 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ARF4P18085 180 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 CXCL2P19875 107 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 PPIBP23284 216 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 VIPR1P32241 457 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 LIMS1P48059 325 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 VEGFCP49767 419 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SMSP52788 366 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RABGGTBP53611 331 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SOX8P57073 446 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RPS25P62851 125 aaKnown RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 HTRA4P83105 476 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 HMGCS1Q01581 520 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 MC2RQ01718 297 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 RBBP4Q09028 425 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 MTAPQ13126 283 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 HLXQ14774 488 aaPredicted RBP5.5□□□□□ -1.53
CASC19-260ENST00000641828 CHRNA6Q15825 494 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZBTB6Q15916 424 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 ZNF124Q15973 351 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 FBXO47Q5MNV8 452 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SLC25A30Q5SVS4 291 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 AFMIDQ63HM1 303 aa5.5□□□□□ -1.53
CASC19-260ENST00000641828 SLC22A10Q63ZE4 541 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms