RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 CDC6Q99741 560 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 CMKLR1Q99788 373 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF350Q9GZX5 532 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 ARMC7Q9H6L4 198 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF556Q9HAH1 456 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 AKIP1Q9NQ31 210 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 SLC22A11Q9NSA0 550 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 SEMA4GQ9NTN9 838 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 C14orf105Q9NVL8 296 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 CNOT2Q9NZN8 540 aaKnown RBP8.2□□□□□ -1.1
PHGDH-219ENST00000641513 COPS7AQ9UBW8 275 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 PSORS1C1Q9UIG5 152 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 CFL2Q9Y281 166 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 ERGIC3Q9Y282 383 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 PCDHGA6Q9Y5G7 932 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 DSPPQ9NZW4 1301 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 HEATR5AQ86XA9 2040 aa8.2□□□□□ -1.1
PHGDH-219ENST00000641513 IGKV3D-11A0A0A0MRZ8 115 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 IGHV3-20A0A0C4DH32 117 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 AGAP5A6NIR3 686 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 TTC36A6NLP5 189 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CPSF4LA6NMK7 179 aaKnown RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CLCA1A8K7I4 914 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 IDSB3KWA1 339 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 C9J4A7 227 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MEN1O00255 615 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PEX12O00623 359 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PCDH17O14917 1159 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PRKNO60260 465 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 KIAA0513O60268 411 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 TPST2O60704 377 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PFDN1O60925 122 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ALOX12BO75342 701 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RFPL3O75679 317 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SULT1C4O75897 302 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 INMTO95050 263 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RECKO95980 971 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ADAP00813 363 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MT-ND2P03891 347 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 THBS1P07996 1170 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CYP4B1P13584 511 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 GABRB1P18505 474 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CBLP22681 906 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MAP3K8P41279 467 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MASP1P48740 699 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PSG6Q00889 435 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 E2F1Q01094 437 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 AQP6Q13520 282 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PIN1Q13526 163 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 EXOSC6Q5RKV6 272 aaKnown RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 DCST1Q5T197 706 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RNLSQ5VYX0 342 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 TCTN3Q6NUS6 607 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 NPSR1Q6W5P4 371 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MED25Q71SY5 747 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SLC29A4Q7RTT9 530 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 OVCH1Q7RTY7 1134 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CCDC71Q8IV32 467 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 P3H2Q8IVL5 708 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ENTHD1Q8IYW4 607 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CLIP4Q8N3C7 705 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SLC5A8Q8N695 610 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 BCORP1Q8N888 145 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF615Q8N8J6 731 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SUMF1Q8NBK3 374 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ZNF540Q8NDQ6 660 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 OR9Q2Q8NGE9 314 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 OR6T1Q8NGN1 323 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RHOXF1Q8NHV9 184 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RNF217Q8TC41 542 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 DYNC2LI1Q8TCX1 351 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 APOBEC4Q8WW27 367 aaKnown RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 APH1BQ8WW43 257 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SLC38A4Q969I6 547 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ITPKCQ96DU7 683 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 VSTM2LQ96N03 204 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SLC46A1Q96NT5 459 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 FEVQ99581 238 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MCHR1Q99705 422 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ARHGDIGQ99819 225 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 WFDC6Q9BQY6 131 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 G6PC3Q9BUM1 346 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 NUDT9Q9BW91 350 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 PRR14Q9BWN1 585 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RSPO3Q9BXY4 272 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ULBP3Q9BZM4 244 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 TGIF2Q9GZN2 237 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 NMNAT1Q9HAN9 279 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 SIAEQ9HAT2 523 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 POLE3Q9NRF9 147 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ACER3Q9NUN7 267 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 RLIMQ9NVW2 624 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CCDC59Q9P031 241 aaKnown RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 ERVK-18Q9QC07 812 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 CBLCQ9ULV8 474 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 GPR55Q9Y2T6 319 aaPredicted RBP8.19□□□□□ -1.1
PHGDH-219ENST00000641513 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 LOXL2Q9Y4K0 774 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 EML6Q6ZMW3 1958 aa8.19□□□□□ -1.1
PHGDH-219ENST00000641513 MPDZO75970 2070 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms