RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 JKAMPQ9P055 326 aa15.11■□□□□ 0.01
CACNA1A-259ENST00000638114 PCDHGB4Q9UN71 923 aa15.11■□□□□ 0.01
CACNA1A-259ENST00000638114 AP4B1Q9Y6B7 739 aa15.11■□□□□ 0.01
CACNA1A-259ENST00000638114 KCNE3Q9Y6H6 103 aa15.11■□□□□ 0.01
CACNA1A-259ENST00000638114 A0A087WZY1 265 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 RNF103-CHMP3A0A140T963 221 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 A0A1W2PNV4 684 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 RNASET2O00584 256 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 TNFRSF21O75509 655 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 SOX30O94993 753 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 ZNF17P17021 662 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 RNF144AP50876 292 aaPredicted RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 RPS3AP61247 264 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 MAGOHP61326 146 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 RPS26P62854 115 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 EEF1A1P68104 462 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 TMEM44Q2T9K0 475 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 EEF1A1P5Q5VTE0 462 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 OR2A2Q6IF42 318 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 ANKRD46Q86W74 232 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 CLEC4FQ8N1N0 589 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 OR8J2Q8NGG1 315 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 OR5D16Q8NGK9 328 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 B4GALNT2Q8NHY0 566 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 PHOSPHO1Q8TCT1 267 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 FAM222BQ8WU58 562 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 FIG4Q92562 907 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 PIGMQ9H3S5 423 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 MED17Q9NVC6 651 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 DNAJB12Q9NXW2 375 aaKnown RBP15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 NKIRAS1Q9NYS0 192 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 STOML1Q9UBI4 398 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 PACSIN3Q9UKS6 424 aa15.1■□□□□ 0.01
CACNA1A-259ENST00000638114 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 TUBAL3A6NHL2 446 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 CTAG2O75638 210 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 TNFSF13O75888 250 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 MATN1P21941 496 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 SORDQ00796 357 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 SGCBQ16585 318 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 PLPPR5Q32ZL2 321 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 BEND6Q5SZJ8 279 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 PPP4R4Q6NUP7 873 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 C6orf120Q7Z4R8 191 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 LRRC34Q8IZ02 419 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 GTPBP8Q8N3Z3 284 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 ZNF614Q8N883 585 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 CNEP1R1Q8N9A8 125 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 FNDC9Q8TBE3 224 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 ACTRT2Q8TDY3 377 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 ZBTB8AQ96BR9 441 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 TESCQ96BS2 214 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 ZNF845Q96IR2 970 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 SLC35G5Q96KT7 338 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 NPAS1Q99742 590 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 KLHDC3Q9BQ90 382 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 GPATCH1Q9BRR8 931 aaKnown RBP15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 HOXD1Q9GZZ0 328 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 THAP1Q9NVV9 213 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 GALNT8Q9NY28 637 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 MARCOQ9UEW3 520 aaPredicted RBP15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 AKAP9Q99996 3911 aa15.09■□□□□ 0.01
CACNA1A-259ENST00000638114 H3BNH8 94 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 EIF1AYO14602 144 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 ANKRD28O15084 1053 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 SMNDC1O75940 238 aaKnown RBP eCLIP15.08■□□□□ 0
CACNA1A-259ENST00000638114 CPSF4O95639 269 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 CRHP06850 196 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 KITP10721 976 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 CPOXP36551 454 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 EIF1AXP47813 144 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 CLNS1AP54105 237 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 ATP12AP54707 1039 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 NME5P56597 212 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 SIRPAP78324 504 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 ZNF117Q03924 483 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 PON3Q15166 354 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 KLHL26Q53HC5 615 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 SPANXN4Q5MJ08 99 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 ANXA8L1Q5VT79 327 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 ATG16L1Q676U5 607 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 MTERF4Q7Z6M4 381 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 GGNQ86UU5 652 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 WDR75Q8IWA0 830 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 METTL25Q8N6Q8 603 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 VPS37AQ8NEZ2 397 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 LINC01560Q8TB33 94 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 TLCD1Q96CP7 247 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 RNF145Q96MT1 663 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 POLDIP3Q9BY77 421 aaKnown RBP15.08■□□□□ 0
CACNA1A-259ENST00000638114 SERHL2Q9H4I8 314 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 TMBIM4Q9HC24 238 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 ZNF175Q9Y473 711 aa15.08■□□□□ 0
CACNA1A-259ENST00000638114 MPDZO75970 2070 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 PRSS51A0A1B0GVH4 220 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 C7orf72A4D263 438 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 DUXAA6NLW8 204 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 A6NNC1 897 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 E9PBE3 544 aa15.07■□□□□ 0
CACNA1A-259ENST00000638114 GTPBP1O00178 669 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms