RNA–Protein interactions for RNA: ENST00000628566.2

NR1I3-235, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 5 BASIC

Gene NR1I3, Length 1,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-235ENST00000628566 TINAGQ9UJW2 476 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 PRDM4Q9UKN5 801 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 MKLN1Q9UL63 735 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF232Q9UNY5 417 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 CAMK2AQ9UQM7 478 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 MEMO1Q9Y316 297 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 PCDHB14Q9Y5E9 798 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 LIPGQ9Y5X9 500 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 SHANK1Q9Y566 2161 aa7.1□□□□□ -1.27
NR1I3-235ENST00000628566 UBR5O95071 2799 aaPredicted RBP7.1□□□□□ -1.27
NR1I3-235ENST00000628566 A0A0G2JPF8 293 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 HNRNPCL2B2RXH8 293 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 HNRNPCL3B7ZW38 293 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 H0Y3Z8 333 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 HNRNPCL1O60812 293 aaKnown RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CYP7B1O75881 506 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 H6PDO95479 791 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 DBIP07108 87 aaKnown RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 HNRNPCL4P0DMR1 293 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CPN1P15169 458 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 PGCP20142 388 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 POU3F2P20265 443 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CAPN3P20807 821 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 AGAP20933 346 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SLC6A2P23975 617 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ADH7P40394 386 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SLC6A8P48029 635 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CCR4P51679 360 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CASP9P55211 416 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 RPS3AP61247 264 aaKnown RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 KLF10Q13118 480 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 RGNQ15493 299 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF141Q15928 474 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 BCL2A1Q16548 175 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 EIPR1Q53HC9 387 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 PDZK1Q5T2W1 519 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 GCNT6Q5T4J0 391 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 C1orf185Q5T7R7 199 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 VASNQ6EMK4 673 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SLC30A8Q8IWU4 369 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF440Q8IYI8 595 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF808Q8N4W9 903 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 DPP10Q8N608 796 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 GATSQ8NAP1 163 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 OR10Q1Q8NGQ4 319 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 OR5W2Q8NH69 310 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF563Q8TA94 476 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 BBS10Q8TAM1 723 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 WDR60Q8WVS4 1066 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ASB5Q8WWX0 329 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 RND1Q92730 232 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CMTM5Q96DZ9 223 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 LRRC46Q96FV0 321 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SH3YL1Q96HL8 342 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF607Q96SK3 696 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 TIMP4Q99727 224 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ELAC2Q9BQ52 826 aaKnown RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 THUMPD3Q9BV44 507 aaKnown RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SAP130Q9H0E3 1048 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SERHL2Q9H4I8 314 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 ZNF385DQ9H6B1 395 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SAR1AQ9NR31 198 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 PNPLA3Q9NST1 481 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 FLRT3Q9NZU0 649 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 FBXL2Q9UKC9 423 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SLC13A4Q9UKG4 626 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 CARD8Q9Y2G2 431 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 RPH3AQ9Y2J0 694 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 AP3M1Q9Y2T2 418 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SLC6A5Q9Y345 797 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 IFT52Q9Y366 437 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 GPC6Q9Y625 555 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SPIN1Q9Y657 262 aaPredicted RBP7.09□□□□□ -1.27
NR1I3-235ENST00000628566 AP4B1Q9Y6B7 739 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 KCNE3Q9Y6H6 103 aa7.09□□□□□ -1.27
NR1I3-235ENST00000628566 SPENQ96T58 3664 aaKnown RBP7.08□□□□□ -1.28
NR1I3-235ENST00000628566 C7orf72A4D263 438 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 PRORSD1PA6NEY8 169 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 NPIPB9F8W1W9 429 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 NDUFAB1O14561 156 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 GMFGO60234 142 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 FCMRO60667 390 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 SEMA7AO75326 666 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 SERPINB7O75635 380 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 UGT2B17O75795 530 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 DCTN3O75935 186 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 LDLRP01130 860 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 IL2RAP01589 272 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 BCHEP06276 602 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 THBS1P07996 1170 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 UBTFL6P0CB48 400 aaPredicted RBP7.08□□□□□ -1.28
NR1I3-235ENST00000628566 ETFAP13804 333 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 BMP7P18075 431 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 FKBP2P26885 142 aaKnown RBP7.08□□□□□ -1.28
NR1I3-235ENST00000628566 ADH6P28332 368 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 CHRNB4P30926 498 aa7.08□□□□□ -1.28
NR1I3-235ENST00000628566 ZFP36L2P47974 494 aaKnown RBP7.08□□□□□ -1.28
NR1I3-235ENST00000628566 EEF1A1P68104 462 aaKnown RBP7.08□□□□□ -1.28
NR1I3-235ENST00000628566 CHRNEQ04844 493 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms