RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 COPS4Q9BT78 406 aa8.44□□□□□ -1.06
HDAC9-229ENST00000622668 NDRG3Q9UGV2 375 aa8.44□□□□□ -1.06
HDAC9-229ENST00000622668 ASB1Q9Y576 335 aa8.44□□□□□ -1.06
HDAC9-229ENST00000622668 P2RX6O15547 441 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SLITRK5O94991 958 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 LCKP06239 509 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PTGS2P35354 604 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 STT3AP46977 705 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 CSNK1A1P48729 337 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PRKXP51817 358 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MLLT10P55197 1068 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 FOXL2P58012 376 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SLC26A5P58743 744 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 RNF4P78317 190 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 TXNL4AP83876 142 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 POU3F1Q03052 451 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 EIF4EBP2Q13542 120 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 IGFN1Q86VF2 1251 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 ZSCAN4Q8NAM6 433 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 FANK1Q8TC84 345 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 ULBP2Q9BZM5 246 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 BCL2L14Q9BZR8 327 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 FAM192AQ9GZU8 254 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 NXF5Q9H1B4 397 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 GSTK1Q9Y2Q3 226 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 A0A1W2PQ72 361 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PLSCR5A0PG75 271 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 FTCDNL1E5RQL4 147 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 ZNF20P17024 532 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PIN1Q13526 163 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 CACTIN-AS1Q8N1I8 211 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 CBR4Q8N4T8 237 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PRMT8Q9NR22 394 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 DNAJB9Q9UBS3 223 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MRPS18BQ9Y676 258 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 NUP214P35658 2090 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PTPN13Q12923 2485 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 FURINP09958 794 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PNMTP11086 282 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 IRF2P14316 349 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PNLIPP16233 465 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PRKCAP17252 672 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 BMP5P22003 454 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 DNAJA1P31689 397 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 HTR3AP46098 478 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 GCGRP47871 477 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 ATP4BP51164 291 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MC2RQ01718 297 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 INAQ16352 499 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 DCAF10Q5QP82 559 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MRPL2Q5T653 305 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MRGPREQ86SM8 312 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 VRK2Q86Y07 508 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SLITRK4Q8IW52 837 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 NRMQ8IXM6 262 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PQLC1Q8N2U9 271 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PIAS4Q8N2W9 510 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 LINC00471Q8N535 108 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 OR4C15Q8NGM1 316 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 OR2A5Q96R48 311 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 UCK2Q9BZX2 261 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 COMMD4Q9H0A8 199 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SERHL2Q9H4I8 314 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SDR39U1Q9NRG7 319 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 IL17BQ9UHF5 180 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PCDHB10Q9UN67 800 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 POMPQ9Y244 141 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PCDHGB7Q9Y5F8 929 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 AP4B1Q9Y6B7 739 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 TRGV5A0A0B4J1U4 118 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 SERINC4A6NH21 518 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 BCKDKO14874 412 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 NPPAP01160 153 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 CAPN3P20807 821 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 TACR3P29371 465 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 EIF1P41567 113 aaKnown RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PRSS42Q7Z5A4 293 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MISPQ8IVT2 679 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PARP8Q8N3A8 854 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 OR8J3Q8NGG0 315 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 LRTOMTQ8WZ04 291 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 MYDGFQ969H8 173 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 C1GALT1C1Q96EU7 318 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 PIGUQ9H490 435 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 CXorf21Q9HAI6 301 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 TMPRSS11EQ9UL52 423 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 NEU3Q9UQ49 428 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 RLFQ13129 1914 aa8.43□□□□□ -1.06
HDAC9-229ENST00000622668 ATRXP46100 2492 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 CKAP5Q14008 2032 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 THADAQ6YHU6 1953 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 IQCMA0A1B0GVH7 501 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 FUT1P19526 365 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 ENTPD1P49961 510 aa8.42□□□□□ -1.06
HDAC9-229ENST00000622668 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 KRR1Q13601 381 aaKnown RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 LACTB2Q53H82 288 aaPredicted RBP8.42□□□□□ -1.06
HDAC9-229ENST00000622668 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms