RNA–Protein interactions for RNA: ENST00000622309.4

VPS11-209, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 3,352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-209ENST00000622309 TRAPPC13A5PLN9 417 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 GABRPO00591 440 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 IMPA2O14732 288 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 SOX14O95416 240 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CPSF4O95639 269 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 B3GALT4O96024 378 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OTCP00480 354 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 IGHA2P01877 340 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 ATXN1LP0C7T5 689 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 ZNF35P13682 527 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 GNSP15586 552 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 MAPK3P27361 379 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 ADRA1AP35348 466 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 HTR5AP47898 357 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CCR9P51686 369 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 MPPE1Q53F39 396 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 IFI44LQ53G44 452 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 FAM111BQ6SJ93 734 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 MOB3CQ70IA8 216 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PCSK9Q8NBP7 692 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 OR4C15Q8NGM1 316 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OR8J1Q8NGP2 316 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 BRI3BPQ8WY22 251 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RAB3CQ96E17 227 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 LCORQ96JN0 433 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CNTNAP3BQ96NU0 1288 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 TSSK3Q96PN8 268 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 AARSD1Q9BTE6 412 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 TLNRD1Q9H1K6 362 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 KCNK12Q9HB15 430 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CACYBPQ9HB71 228 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 HMX1Q9NP08 348 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 DUSP22Q9NRW4 184 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PIGVQ9NUD9 493 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RBPJLQ9UBG7 517 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 AKT3Q9Y243 479 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 A0A1W2PPE3 182 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 UBE2QL1A1L167 161 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CXorf65A6NEN9 183 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 COLCA2A8K830 154 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 LRRN3E7EW58 273 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 I6L893 689 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 GABRDO14764 452 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 LRATO95237 230 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OPN1SWP03999 348 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 ANKRD34CP0C6C1 535 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PSMB1P20618 241 aaKnown RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 ACHEP22303 614 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PAX6P26367 422 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 CXCR3P49682 368 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 DGCR2P98153 550 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OC90Q02509 493 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 SCARB2Q14108 478 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 VEZF1Q14119 521 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 C18orf63Q68DL7 685 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 NHLRC1Q6VVB1 395 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 ADAMTS18Q8TE60 1221 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PIGQQ9BRB3 760 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 C2orf88Q9BSF0 95 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 RSRP1Q9BUV0 290 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 TMEM106CQ9BVX2 250 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 LRRN3Q9H3W5 708 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
VPS11-209ENST00000622309 PTGFRNQ9P2B2 879 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 PCDHB10Q9UN67 800 aa7.42□□□□□ -1.22
VPS11-209ENST00000622309 OR2M5A3KFT3 312 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 H7C0S8 307 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 AP4M1O00189 453 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 TLX2O43763 284 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 SCN2BO60939 215 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ITGA10O75578 1167 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 CNMDO75829 334 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 OR2A4O95047 310 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PEX11BO96011 259 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 GASTP01350 101 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 WNT1P04628 370 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 EBLN1P0CF75 366 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ZNF286BP0CG31 522 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 BCKDHAP12694 445 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ABOP16442 354 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 ADCYAP1P18509 176 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 CELP19835 753 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 DDTP30046 118 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 SUOXP51687 545 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 DLX5P56178 289 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 SIM1P81133 766 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 TM4SF20Q53R12 229 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 METTL7BQ6UX53 244 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 LHFPL3Q86UP9 236 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PTOV1Q86YD1 416 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 OR6V1Q8N148 313 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 OR1S2Q8NGQ3 325 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 MISP3Q96FF7 219 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 OR2A7Q96R45 310 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 JAM3Q9BX67 310 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 PINK1Q9BXM7 581 aa7.41□□□□□ -1.22
VPS11-209ENST00000622309 OPN3Q9H1Y3 402 aaPredicted RBP7.41□□□□□ -1.22
VPS11-209ENST00000622309 IPPKQ9H8X2 491 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms