RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 SLC22A6Q4U2R8 563 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 FAM71F2Q6NXP2 309 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 FAHD2BQ6P2I3 314 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 APTXQ7Z2E3 356 aaKnown RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 GTSCR1Q86UQ5 136 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 SERINC5Q86VE9 423 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 SERPINA9Q86WD7 417 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 LINC01561Q8N1V8 128 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 AGAP11Q8TF27 550 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 AENQ8WTP8 325 aaKnown RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 FAHD2AQ96GK7 314 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 SLC6A7Q99884 636 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 APOL2Q9BQE5 337 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 PNO1Q9NRX1 252 aaKnown RBP3.79□□□□□ -1.8
CPNE3-213ENST00000622183 L3MBTL1Q9Y468 752 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 OARD1Q9Y530 152 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 CSAG2Q9Y5P2 127 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 USP16Q9Y5T5 823 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 MAD1L1Q9Y6D9 718 aa3.79□□□□□ -1.8
CPNE3-213ENST00000622183 PTCH1Q13635 1447 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 PCNX3Q9H6A9 2034 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 A0A087WWV3 80 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 A8MX80 341 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 NPIPA7E9PJI5 369 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 MSH4O15457 936 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ZNF354AO60765 605 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-213ENST00000622183 NPIPA8P0DM63 369 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ACADSP16219 412 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 AP3M2P53677 418 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ERVPABLB-1P60509 514 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 UBE2HP62256 183 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 PAX2Q02962 417 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 RAB40BQ12829 278 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 LAGE3Q14657 143 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 PDK3Q15120 406 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 SLC5A12Q1EHB4 618 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ATF7IP2Q5U623 682 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 RNLSQ5VYX0 342 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ACOT1Q86TX2 421 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 NAXDQ8IW45 347 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 C9orf40Q8IXQ3 194 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 MCOLN2Q8IZK6 566 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 CSNK1A1LQ8N752 337 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 C15orf54Q8N8G6 183 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 Q8N9G6 341 aaPredicted RBP3.78□□□□□ -1.8
CPNE3-213ENST00000622183 STXBP6Q8NFX7 210 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 FAM222BQ8WU58 562 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 C7orf34Q96L11 122 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 C12orf66Q96MD2 445 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 AMDHD1Q96NU7 426 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 ELOVL4Q9GZR5 314 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 AIPL1Q9NZN9 384 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 PIPOXQ9P0Z9 390 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 XPO7Q9UIA9 1087 aaKnown RBP3.78□□□□□ -1.8
CPNE3-213ENST00000622183 NPIPA1Q9UND3 350 aa3.78□□□□□ -1.8
CPNE3-213ENST00000622183 SAMD4AQ9UPU9 718 aaKnown RBP3.78□□□□□ -1.8
CPNE3-213ENST00000622183 FRMPD4Q14CM0 1322 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 MPHOSPH10O00566 681 aaKnown RBP3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OR7A17O14581 309 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 CXCL11O14625 94 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 GPRIN2O60269 458 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 CRLF1O75462 422 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OPN1MWP04001 364 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OPN1MW2P0DN77 364 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OPN1MW3P0DN78 364 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 IGHV1-2P23083 117 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 PTBP1P26599 531 aaKnown RBP eCLIP3.77□□□□□ -1.81
CPNE3-213ENST00000622183 HPCAL1P37235 193 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 MAGEA9P43362 315 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 LIM2P55344 173 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 SLC8A3P57103 927 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 VLDLRP98155 873 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 KCNJ11Q14654 390 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 MESDQ14696 234 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 NDUFA9Q16795 377 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 TIGITQ495A1 244 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 CEP55Q53EZ4 464 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 EIPR1Q53HC9 387 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 TMEM225Q6GV28 225 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 LCA5Q86VQ0 697 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 ZCCHC7Q8N3Z6 543 aaKnown RBP3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OR2T33Q8NG76 320 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 OR10A7Q8NGE5 316 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 SH3YL1Q96HL8 342 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-213ENST00000622183 CITED1Q99966 193 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 DPH7Q9BTV6 452 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 GLT8D2Q9H1C3 349 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 PPDPFQ9H3Y8 114 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 WRAP73Q9P2S5 460 aaPredicted RBP3.77□□□□□ -1.81
CPNE3-213ENST00000622183 ZNF221Q9UK13 617 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 RPH3ALQ9UNE2 315 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 SLCO1B1Q9Y6L6 691 aa3.77□□□□□ -1.81
CPNE3-213ENST00000622183 COL5A2P05997 1499 aaPredicted RBP3.76□□□□□ -1.81
CPNE3-213ENST00000622183 E9PLD3 99 aa3.76□□□□□ -1.81
CPNE3-213ENST00000622183 ARPC3O15145 178 aa3.76□□□□□ -1.81
CPNE3-213ENST00000622183 LATO43561 262 aa3.76□□□□□ -1.81
CPNE3-213ENST00000622183 GAS8-AS1O95177 125 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms