RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 FUT1P19526 365 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 CYB561P49447 251 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 POLR2HP52434 150 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 ERVK-16P61578 105 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 EIF2B1Q14232 305 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 EXOSC7Q15024 291 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 TMEM236Q5W0B7 351 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 STEAP4Q687X5 459 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 METTL2BQ6P1Q9 378 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 WDR53Q7Z5U6 358 aaPredicted RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 SPEM1Q8N4L4 309 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 FCAMRQ8WWV6 532 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 WDR83Q9BRX9 315 aaKnown RBP9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 ANKRD60Q9BZ19 345 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 FAM118AQ9NWS6 357 aa9.21□□□□□ -0.94
CLTCL1-211ENST00000621271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LRRN3E7EW58 273 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ABLIM3O94929 683 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SLITRK5O94991 958 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 CPMP14384 443 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 GM2AP17900 193 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 HTR1EP28566 365 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ERVPABLB-1P60509 514 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 MBTPS1Q14703 1052 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 GRK1Q15835 563 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 RAB41Q5JT25 222 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ISCA2Q86U28 154 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 OR4K5Q8NGD3 323 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SENP5Q96HI0 755 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 TXNDC15Q96J42 360 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 FAM71F1Q96KD3 344 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 KLHL15Q96M94 604 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 IP6K3Q96PC2 410 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC6A7Q99884 636 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LRRN3Q9H3W5 708 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ITGB4P16144 1822 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 JRKO75564 520 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 F10P00742 488 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 BMP2P12643 396 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PSMB5P28074 263 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 UQCRC1P31930 480 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PITPNBP48739 271 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 RAB38P57729 211 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 MAT1AQ00266 395 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 KANK2Q63ZY3 851 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 AWAT2Q6E213 333 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 MINDY1Q8N5J2 469 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 TBC1D15Q8TC07 691 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 TRIM43Q96BQ3 446 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PRRX2Q99811 253 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 DHCR7Q9UBM7 475 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 MAP1BP46821 2468 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 A0A1W2PPK0 400 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 RBBP9O75884 186 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 HMGN2P05204 90 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PET100P0DJ07 73 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PRDX3P30048 256 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SOX3P41225 446 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 OR1D5P58170 312 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 GABARAPL2P60520 117 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 TMEM69Q5SWH9 247 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 DCDC5Q6ZRR9 648 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LHFPL3Q86UP9 236 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LSMEM2Q8N112 164 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF480Q8WV37 535 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 COG8Q96MW5 612 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 OR2B2Q9GZK3 357 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC6A17Q9H1V8 727 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 INIPQ9NRY2 104 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC7A7Q9UM01 511 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PCDHA9Q9Y5H5 950 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 A0A087WUU8 490 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 I3L521 148 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 C1SP09871 688 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 GTF2F2P13984 249 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 EIF2S3P41091 472 aaKnown RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 PGGT1BP53609 377 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 TMEM176BQ3YBM2 270 aaPredicted RBP9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 C9orf50Q5SZB4 431 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 MFSD9Q8NBP5 474 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 OR1J2Q8NGS2 313 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 NEIL3Q8TAT5 605 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 LRR1Q96L50 414 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SGCZQ96LD1 299 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC19A3Q9BZV2 496 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 WIF1Q9Y5W5 379 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ALG5Q9Y673 324 aa9.2□□□□□ -0.94
CLTCL1-211ENST00000621271 ARGFXA6NJG6 315 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 PPP1R3DO95685 299 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 IGHG1P01857 330 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 GLULP15104 373 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CCR7P32248 378 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 CDKN2CP42773 168 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 RELAQ04206 551 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 EXT1Q16394 746 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 SLC22A10Q63ZE4 541 aa9.19□□□□□ -0.94
CLTCL1-211ENST00000621271 ZNF585AQ6P3V2 769 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms