RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 REM1O75628 298 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 UGT2B17O75795 530 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 SOX30O94993 753 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 UTS2O95399 124 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 SNAP29O95721 258 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 IL33O95760 270 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 THBS1P07996 1170 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 CYC1P08574 325 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 GKN3PP0CG01 181 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 COX6A1P12074 109 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 PRG2P13727 222 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 NID1P14543 1247 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ITGA2P17301 1181 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TCN2P20062 427 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 DRD5P21918 477 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ITPKBP27987 946 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 OTX2P32243 289 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 EIF2S3P41091 472 aaKnown RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 RGS8P57771 180 aaPredicted RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 RNF4P78317 190 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 GABREP78334 506 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 PLAURQ03405 335 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 DECR1Q16698 335 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 EXOC3L2Q2M3D2 409 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 NDUFAF6Q330K2 333 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TBC1D25Q3MII6 688 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 FGD3Q5JSP0 725 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TMEM164Q5U3C3 297 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 TCTN3Q6NUS6 607 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 HSDL2Q6YN16 418 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 CYP4Z1Q86W10 505 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 HIPK1Q86Z02 1210 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 SLC34A3Q8N130 599 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 PACRGLQ8N7B6 248 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 GATSQ8NAP1 163 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 APCDD1LQ8NCL9 501 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 MAGEE2Q8TD90 523 aaPredicted RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 CNOT9Q92600 299 aaKnown RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 OMA1Q96E52 524 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 VMP1Q96GC9 406 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF597Q96LX8 424 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 EPYCQ99645 322 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 G6PC3Q9BUM1 346 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 SEMA4CQ9C0C4 833 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ASCL3Q9NQ33 180 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 ACER3Q9NUN7 267 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 KLHL28Q9NXS3 571 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 PDP1Q9P0J1 537 aaPredicted RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 KCND3Q9UK17 655 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 CNOT11Q9UKZ1 510 aaKnown RBP7.45□□□□□ -1.22
TARDBP-213ENST00000611963 A4GNTQ9UNA3 340 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 HS3ST3B1Q9Y662 390 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 AP4B1Q9Y6B7 739 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 LOC400499M0QZD8 3231 aa7.45□□□□□ -1.22
TARDBP-213ENST00000611963 MED12Q93074 2177 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ITPR1Q14643 2758 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 IGHV1-45A0A0A0MS14 117 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 LOC101059948A0A1B0GTJ6 334 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 CDHR4A6H8M9 788 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 TMEM200CA6NKL6 621 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 CPSF4LA6NMK7 179 aaKnown RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 WWP2O00308 870 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 SOCS6O14544 535 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 PCDH17O14917 1159 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 TO15178 435 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 OIP5O43482 229 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 HS6ST1O60243 411 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 RAD1O60671 282 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF354AO60765 605 aaPredicted RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ICOSLGO75144 302 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 NTN1O95631 604 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 OXSR1O95747 527 aaPredicted RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ALPLP05186 524 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 H1F0P07305 194 aaKnown RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 RAB40ALP0C0E4 278 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 CYP4B1P13584 511 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 UQCRBP14927 111 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ACADSP16219 412 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 F8A1P23610 371 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ABCD3P28288 659 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 IL12BP29460 328 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 DLSTP36957 453 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ST13P50502 369 aaKnown RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 DAPP51397 102 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ALDH3A2P51648 485 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF136P52737 540 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ATP12AP54707 1039 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 TAS2R41P59536 307 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 DCAF7P61962 342 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 PPP2R2BQ00005 443 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 PLCXD2Q0VAA5 305 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 DNASE1L3Q13609 305 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ZNF141Q15928 474 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 BTBD16Q32M84 506 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 ZIK1Q3SY52 487 aaPredicted RBP7.44□□□□□ -1.22
TARDBP-213ENST00000611963 LCE2CQ5TA81 110 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 RNF220Q5VTB9 566 aa7.44□□□□□ -1.22
TARDBP-213ENST00000611963 KIRREL2Q6UWL6 708 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms