RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 CYLC1P35663 651 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 SLC25A1P53007 311 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 CXCL6P80162 114 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 PLOD1Q02809 727 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 CHIT1Q13231 466 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 STK11Q15831 433 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 DCAF4L1Q3SXM0 396 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 HSP90AA5PQ58FG0 334 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 ZNF311Q5JNZ3 666 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 LRRC8BQ6P9F7 803 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 TMEM184AQ6ZMB5 413 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 LHFPL4Q7Z7J7 247 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 CBWD2Q8IUF1 395 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 MCOLN2Q8IZK6 566 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 CD177Q8N6Q3 437 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 LINC00612Q8N6U2 182 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 LINC00469Q8N7U9 141 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 C17orf50Q8WW18 174 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 GTSF1Q8WW33 167 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 SIGLEC12Q96PQ1 595 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 VPS35Q96QK1 796 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 RHOXF2Q9BQY4 288 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 ELOVL4Q9GZR5 314 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 COMMD4Q9H0A8 199 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 GPN2Q9H9Y4 310 aaPredicted RBP3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 SLC35D1Q9NTN3 355 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 COX16Q9P0S2 106 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 GALPQ9UBC7 116 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 CHMP2BQ9UQN3 213 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 AP4B1Q9Y6B7 739 aa3.23□□□□□ -1.89
SMCHD1-213ENST00000609587 HCFC1P51610 2035 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 USP6P35125 1406 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GON4LQ3T8J9 2241 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GOLGA6L7A0A1B0GV03 622 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GPR89AB7ZAQ6 455 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 CLDN3O15551 220 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 SPOPO43791 374 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 OR4F21O95013 312 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 DUSP14O95147 198 aaKnown RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 STAMBPO95630 424 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 IFNB1P01574 187 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GPR89BP0CG08 455 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 ANXA3P12429 323 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 NCF1P14598 390 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 H2AFXP16104 143 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 XCR1P46094 333 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 DHPSP49366 369 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 SERTAD2Q14140 314 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 TGIF1Q15583 401 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 CYP51A1Q16850 503 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GSG1Q2KHT4 349 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 QRICH1Q2TAL8 776 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 OLFML2AQ68BL7 652 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 CGB2Q6NT52 195 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 SCYL2Q6P3W7 929 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 NIPAL3Q6P499 406 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 AFTPHQ6ULP2 937 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 CENPUQ71F23 418 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 ZPLD1Q8TCW7 415 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 RAB7BQ96AH8 199 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 DTNBP1Q96EV8 351 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 DHTKD1Q96HY7 919 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 TM2D1Q9BX74 207 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GCOM2Q9BZD3 368 aaPredicted RBP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 CLSTN2Q9H4D0 955 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 AGPAT5Q9NUQ2 364 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 AATFQ9NY61 560 aaKnown RBP eCLIP3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 RDH8Q9NYR8 311 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 DPM3Q9P2X0 92 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 RNF6Q9Y252 685 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 GMPPBQ9Y5P6 360 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 METP08581 1390 aa3.22□□□□□ -1.89
SMCHD1-213ENST00000609587 IGHV3-35A0A0C4DH35 117 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 A0A1B0GUL7 405 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 XKRY2A2RUG3 117 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 SDHDO14521 159 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 STX11O75558 287 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 NOL4O94818 638 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 ANP32DO95626 131 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 POLR2MP0CAP2 368 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 CALCBP10092 127 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 FASP25445 335 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 GDF1P27539 372 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 GDI1P31150 447 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 IL2RGP31785 369 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 CDH5P33151 784 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 MDH2P40926 338 aaKnown RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 GBX2P52951 348 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 CD47Q08722 323 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 TRDNQ13061 729 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 ASAH1Q13510 395 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 DCST2Q5T1A1 773 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 UTF1Q5T230 341 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 AADACL4Q5VUY2 407 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 METTL11BQ5VVY1 283 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 ZNF57Q68EA5 555 aaPredicted RBP3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 PAMR1Q6UXH9 720 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 LRRC70Q7Z2Q7 622 aa3.21□□□□□ -1.9
SMCHD1-213ENST00000609587 HSD11B1LQ7Z5J1 315 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms