RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 NNATQ16517 81 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 FGD3Q5JSP0 725 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 PDZK1Q5T2W1 519 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 MRPL2Q5T653 305 aaKnown RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 ZNF550Q7Z398 422 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 ZAR1Q86SH2 424 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 APLFQ8IW19 511 aaPredicted RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 ZNF440Q8IYI8 595 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 ESX1Q8N693 406 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 DIO2Q92813 273 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 CNBD2Q96M20 576 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 BARD1Q99728 777 aaKnown RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 WDR77Q9BQA1 342 aaPredicted RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 WFDC6Q9BQY6 131 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 TOR3AQ9H497 397 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 KRT84Q9NSB2 600 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 RLIMQ9NVW2 624 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 RHCGQ9UBD6 479 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 TESQ9UGI8 421 aaKnown RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 TMEFF2Q9UIK5 374 aaPredicted RBP12.64□□□□□ -0.39
IRF3-229ENST00000601373 MGAT4BQ9UQ53 548 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
IRF3-229ENST00000601373 CENPVL1A0A0U1RR11 272 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 SERINC4A6NH21 518 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 C9orf172C9J069 976 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 TAF4O00268 1085 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 UGT2B11O75310 529 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 SEMA7AO75326 666 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 REM1O75628 298 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ZFAND5O76080 213 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ITGAMP11215 1152 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 HPGDP15428 266 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 MYF6P23409 242 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ELAVL4P26378 380 aaKnown RBP12.63□□□□□ -0.39
IRF3-229ENST00000601373 IL12BP29460 328 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 IFNGR2P38484 337 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 PNLIPRP2P54317 469 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 NRG3P56975 720 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 FOXL2P58012 376 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 IL18R1Q13478 541 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 LAPTM4AQ15012 233 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ZIK1Q3SY52 487 aaPredicted RBP12.63□□□□□ -0.39
IRF3-229ENST00000601373 KLHL26Q53HC5 615 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ENTPD8Q5MY95 495 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 KRT80Q6KB66 452 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 PLEKHM3Q6ZWE6 761 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 TMPRSS12Q86WS5 348 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 SLC5A8Q8N695 610 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ZNF614Q8N883 585 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 APCDD1LQ8NCL9 501 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 SLC38A4Q969I6 547 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 FEVQ99581 238 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 ZNF559Q9BR84 538 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 TMEM27Q9HBJ8 222 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 RYDENQ9NUL5 291 aaKnown RBP12.63□□□□□ -0.39
IRF3-229ENST00000601373 FAM118AQ9NWS6 357 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 POFUT2Q9Y2G5 429 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 KNTC1P50748 2209 aa12.63□□□□□ -0.39
IRF3-229ENST00000601373 TRBV4-1A0A0J9YWV2 114 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 CLDN24A6NM45 220 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 H3BNH8 94 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 SCDO00767 359 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 SLC16A6O15403 523 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 FRS3O43559 492 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 TSPAN2O60636 221 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 SEC24DO94855 1032 aaPredicted RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 ADAP00813 363 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 NGFRP08138 427 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 FTH1P19P0C7X4 201 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 NAGAP17050 411 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 TCN2P20062 427 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 TBXA2RP21731 343 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 MMP11P24347 488 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 ZNF136P52737 540 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 CHN2P52757 468 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 CLDN6P56747 220 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 RPS15P62841 145 aaKnown RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 PLCXD2Q0VAA5 305 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 KCNAB2Q13303 367 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 EXT1Q16394 746 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 ANKRD34AQ69YU3 496 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 USP51Q70EK9 711 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 NACC2Q96BF6 587 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 EFHD2Q96C19 240 aaPredicted RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 MBOAT4Q96T53 435 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 FUZQ9BT04 418 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 TRIM2Q9C040 744 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 ZNF700Q9H0M5 742 aa12.62□□□□□ -0.39
IRF3-229ENST00000601373 PAPOLBQ9NRJ5 636 aaKnown RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 ZNF223Q9UK11 482 aaPredicted RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 FARSAQ9Y285 508 aaKnown RBP12.62□□□□□ -0.39
IRF3-229ENST00000601373 TRBV11-1A0A0K0K1C0 115 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 TEX51A0A1B0GUA7 166 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 LOC100130705A0A1B0GUX0 176 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 A0A1W2PQ72 361 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 SH3PXD2BA1X283 911 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 TRAPPC13A5PLN9 417 aa12.61□□□□□ -0.39
IRF3-229ENST00000601373 CPSF4LA6NMK7 179 aaKnown RBP12.61□□□□□ -0.39
IRF3-229ENST00000601373 OR10H3O60404 316 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms