RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FOXD4Q12950 439 aaPredicted RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 GRAMD1BQ3KR37 738 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 VWA1Q6PCB0 445 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 FIG4Q92562 907 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 PIK3R3Q92569 461 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 STARD4Q96DR4 205 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 ZBED6CLQ96FA7 236 aaPredicted RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 NOP53Q9NZM5 478 aaKnown RBP16.88■□□□□ 0.29
PNKP-213ENST00000599543 TESMINQ9Y4I5 508 aa16.88■□□□□ 0.29
PNKP-213ENST00000599543 GXYLT2A0PJZ3 443 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 C9JVG2 144 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 ZNF195O14628 629 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 SCAMP2O15127 329 aaKnown RBP16.87■□□□□ 0.29
PNKP-213ENST00000599543 TNFRSF21O75509 655 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 LAMP1P11279 417 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 ASMTP46597 345 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 PRKAG1P54619 331 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 MANFP55145 182 aaKnown RBP16.87■□□□□ 0.29
PNKP-213ENST00000599543 CLDN15P56746 228 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 RPS3AP61247 264 aaKnown RBP16.87■□□□□ 0.29
PNKP-213ENST00000599543 SIRPAP78324 504 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 ADAM8P78325 824 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 PDE7AQ13946 482 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 PON3Q15166 354 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 GLYR1Q49A26 553 aaPredicted RBP16.87■□□□□ 0.29
PNKP-213ENST00000599543 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 CEP70Q8NHQ1 597 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 FNDC9Q8TBE3 224 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 PIWIL2Q8TC59 973 aaKnown RBP16.87■□□□□ 0.29
PNKP-213ENST00000599543 MS4A4EQ96PG1 132 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 OR52B2Q96RD2 323 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 HHATLQ9HCP6 504 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 ZNF175Q9Y473 711 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 USH1CQ9Y6N9 552 aa16.87■□□□□ 0.29
PNKP-213ENST00000599543 IGKV1D-16P01601 117 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 FCGR2AP12318 317 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 CLDN20P56880 219 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 FAM27E3Q08E93 113 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 SF3A3Q12874 501 aaKnown RBP eCLIP16.86■□□□□ 0.29
PNKP-213ENST00000599543 FGFBP1Q14512 234 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 PGS1Q32NB8 556 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 BTLAQ7Z6A9 289 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 HOMEZQ8IX15 550 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 KIRREL3Q8IZU9 778 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 CDRT4Q8N9R6 151 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 NUP43Q8NFH3 380 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 FBXO30Q8TB52 745 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 SLC9A6Q92581 669 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 ZNF845Q96IR2 970 aaPredicted RBP16.86■□□□□ 0.29
PNKP-213ENST00000599543 MAGEB18Q96M61 343 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 C7orf26Q96N11 449 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 SLC39A3Q9BRY0 314 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 MED18Q9BUE0 208 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 OPN3Q9H1Y3 402 aaPredicted RBP16.86■□□□□ 0.29
PNKP-213ENST00000599543 RNF122Q9H9V4 155 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 STOML1Q9UBI4 398 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 ATP6V1HQ9UI12 483 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 VDAC3Q9Y277 283 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 AP4B1Q9Y6B7 739 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 ARID1AO14497 2285 aa16.86■□□□□ 0.29
PNKP-213ENST00000599543 IGLV3-32A0A0A0MS00 114 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 TRPC5OSA6NMA1 111 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 EMC8O43402 210 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 NDUFB5O43674 189 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 TBX19O60806 448 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 NKX2-2O95096 273 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 POU2F1P14859 743 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 CD79BP40259 229 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 KIR2DL2P43627 348 aaPredicted RBP16.85■□□□□ 0.29
PNKP-213ENST00000599543 KCNJ5P48544 419 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 PCYT1AP49585 367 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 MAD2L1Q13257 205 aaPredicted RBP16.85■□□□□ 0.29
PNKP-213ENST00000599543 SGCBQ16585 318 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 PPP4R4Q6NUP7 873 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 APOOLQ6UXV4 268 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 GALNT10Q86SR1 603 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 RIMKLAQ8IXN7 391 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 METTL25Q8N6Q8 603 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 HOXB13Q92826 284 aaPredicted RBP16.85■□□□□ 0.29
PNKP-213ENST00000599543 NEUROD4Q9HD90 331 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 ACSS1Q9NUB1 689 aaPredicted RBP16.85■□□□□ 0.29
PNKP-213ENST00000599543 KLHL28Q9NXS3 571 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 ASIC5Q9NY37 505 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 ELOVL5Q9NYP7 299 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 ZNF226Q9NYT6 803 aa16.85■□□□□ 0.29
PNKP-213ENST00000599543 A0A1W2PPR1 153 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 SHISA8B8ZZ34 492 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 ALG1L2C9J202 215 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 SLCO1B7G3V0H7 640 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 HPGDP15428 266 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 ZNF17P17021 662 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 DDX5P17844 614 aaKnown RBP16.84■□□□□ 0.29
PNKP-213ENST00000599543 UGT2B10P36537 528 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 MAP3K8P41279 467 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 FRKP42685 505 aaPredicted RBP16.84■□□□□ 0.29
PNKP-213ENST00000599543 CPTPQ5TA50 214 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 ZNF474Q6S9Z5 364 aaPredicted RBP16.84■□□□□ 0.29
PNKP-213ENST00000599543 JADE3Q92613 823 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 TEX37Q96LM6 180 aa16.84■□□□□ 0.29
PNKP-213ENST00000599543 EBF4Q9BQW3 602 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms