RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 FCGR2AP12318 317 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 WDR4P57081 412 aaKnown RBP13.03□□□□□ -0.32
DDX39A-208ENST00000588692 BEND6Q5SZJ8 279 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-208ENST00000588692 ANXA8L1Q5VT79 327 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 ZZZ3Q8IYH5 903 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 GCNT2Q8N0V5 402 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 GTPBP8Q8N3Z3 284 aaPredicted RBP13.03□□□□□ -0.32
DDX39A-208ENST00000588692 METTL25Q8N6Q8 603 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 GATSQ8NAP1 163 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 VPS37AQ8NEZ2 397 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 OR5AK3PQ8NH89 298 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 ZBTB9Q96C00 473 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 THAP1Q9NVV9 213 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 NKIRAS1Q9NYS0 192 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 CRIM1Q9NZV1 1036 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 VDAC3Q9Y277 283 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 CCDC168Q8NDH2 2452 aa13.03□□□□□ -0.32
DDX39A-208ENST00000588692 A0A1W2PNV4 684 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 TUBAL3A6NHL2 446 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 TRPC5OSA6NMA1 111 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 H3BNH8 94 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 ANKRD28O15084 1053 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 GMFGO60234 142 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 SNNO75324 88 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-208ENST00000588692 CPA2P48052 419 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 SUCLG1P53597 346 aaKnown RBP13.02□□□□□ -0.33
DDX39A-208ENST00000588692 CLDN15P56746 228 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 FGFBP1Q14512 234 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 CD226Q15762 336 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 PLPPR5Q32ZL2 321 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 ATG16L1Q676U5 607 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 OR5M1Q8NGP8 315 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 B4GALNT2Q8NHY0 566 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 OR7D2Q96RA2 312 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 RBM24Q9BX46 236 aaKnown RBP13.02□□□□□ -0.33
DDX39A-208ENST00000588692 PINK1Q9BXM7 581 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 MED17Q9NVC6 651 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 PNPOQ9NVS9 261 aa13.02□□□□□ -0.33
DDX39A-208ENST00000588692 PAQR5Q9NXK6 330 aaPredicted RBP13.02□□□□□ -0.33
DDX39A-208ENST00000588692 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 RNF103-CHMP3A0A140T963 221 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 PRSS51A0A1B0GVH4 220 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 SLCO1B7G3V0H7 640 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 HDAC3O15379 428 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 CTAG2O75638 210 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 TNFSF13O75888 250 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 GOSR1O95249 250 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 EIF1P41567 113 aaKnown RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 ATP12AP54707 1039 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 SUMO3P55854 103 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 CLDN20P56880 219 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 MAGOHP61326 146 aaKnown RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 KLHL26Q53HC5 615 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 PLXDC2Q6UX71 529 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 C6orf120Q7Z4R8 191 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 GGNQ86UU5 652 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 WDR75Q8IWA0 830 aaKnown RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 CHDHQ8NE62 594 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 OR4A15Q8NGL6 344 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 MGARPQ8TDB4 240 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 SMPDL3BQ92485 455 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 TLCD1Q96CP7 247 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 SH3YL1Q96HL8 342 aaPredicted RBP13.01□□□□□ -0.33
DDX39A-208ENST00000588692 SLC35G5Q96KT7 338 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 RNF122Q9H9V4 155 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 TMBIM4Q9HC24 238 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 KCNE3Q9Y6H6 103 aa13.01□□□□□ -0.33
DDX39A-208ENST00000588692 FAM221AA4D161 298 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 A6NNC1 897 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 E9PBE3 544 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 NPIPB9F8W1W9 429 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 H0YC42 278 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 SDHDO14521 159 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 MSTNO14793 375 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 SCN2BO60939 215 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 AGR2O95994 175 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 MATN1P21941 496 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 ME2P23368 584 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 PSMA4P25789 261 aaKnown RBP13□□□□□ -0.33
DDX39A-208ENST00000588692 PCYT1AP49585 367 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
DDX39A-208ENST00000588692 RAC1P63000 192 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF117Q03924 483 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 SNTB1Q13884 538 aaKnown RBP13□□□□□ -0.33
DDX39A-208ENST00000588692 DAZAP2Q15038 168 aaPredicted RBP13□□□□□ -0.33
DDX39A-208ENST00000588692 PON3Q15166 354 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 SPATA19Q7Z5L4 167 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 LUZP2Q86TE4 346 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 OR5D16Q8NGK9 328 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 FNDC9Q8TBE3 224 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 PHOSPHO1Q8TCT1 267 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 MIPOL1Q8TD10 442 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 FIG4Q92562 907 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 SDF2Q99470 211 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 NMUR2Q9GZQ4 415 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 EXD2Q9NVH0 621 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 AIG1Q9NVV5 245 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 DNAJB12Q9NXW2 375 aaKnown RBP13□□□□□ -0.33
DDX39A-208ENST00000588692 GALNT8Q9NY28 637 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms