RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CLCF1Q9UBD9 225 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 FBN2P35556 2912 aa18.45■□□□□ 0.54
SS18-224ENST00000584083 A0A1W2PQD3 144 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 DUXAA6NLW8 204 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 SHISA8B8ZZ34 492 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 EEF1E1-BLOC1S5C9J1V9 151 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 E9PBE3 544 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 SYT5O00445 386 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 EEF1E1O43324 174 aaKnown RBP18.44■□□□□ 0.54
SS18-224ENST00000584083 RCBTB2O95199 551 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 ZNF41P51814 821 aaPredicted RBP18.44■□□□□ 0.54
SS18-224ENST00000584083 UFM1P61960 85 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 PHC1P78364 1004 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 OCRLQ01968 901 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 FOXF2Q12947 444 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 FLYWCH1Q4VC44 716 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 B4GALNT2Q8NHY0 566 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 ZNF75CPQ92670 426 aaPredicted RBP18.44■□□□□ 0.54
SS18-224ENST00000584083 RNASE6Q93091 150 aaKnown RBP18.44■□□□□ 0.54
SS18-224ENST00000584083 ZBTB18Q99592 522 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 MCCC2Q9HCC0 563 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 STOML1Q9UBI4 398 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 KCNN3Q9UGI6 736 aa18.44■□□□□ 0.54
SS18-224ENST00000584083 A0A087WZY1 265 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 H0YC42 278 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 H3BNH8 94 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 HCRTR2O43614 444 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 SCN2BO60939 215 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 IL18BPO95998 194 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 UQCRC2P22695 453 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 RNF144AP50876 292 aaPredicted RBP18.43■□□□□ 0.54
SS18-224ENST00000584083 CASP9P55211 416 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 TPD52P55327 224 aaPredicted RBP18.43■□□□□ 0.54
SS18-224ENST00000584083 SNTB1Q13884 538 aaKnown RBP18.43■□□□□ 0.54
SS18-224ENST00000584083 CD226Q15762 336 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 GCNT2Q8N0V5 402 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 ZNF614Q8N883 585 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 TEX37Q96LM6 180 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 SH3GL2Q99962 352 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 ACBD3Q9H3P7 528 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 SERHL2Q9H4I8 314 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 L3MBTL1Q9Y468 752 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 AP4B1Q9Y6B7 739 aa18.43■□□□□ 0.54
SS18-224ENST00000584083 SLC22A20A6NK97 555 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 C9JVG2 144 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 GTPBP1O00178 669 aaKnown RBP18.42■□□□□ 0.54
SS18-224ENST00000584083 TGM6O95932 706 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 CHI3L1P36222 383 aaPredicted RBP18.42■□□□□ 0.54
SS18-224ENST00000584083 SUCLG1P53597 346 aaKnown RBP18.42■□□□□ 0.54
SS18-224ENST00000584083 ATP12AP54707 1039 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 CLDN15P56746 228 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 CLDN20P56880 219 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 TMEM44Q2T9K0 475 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 FBXL19-AS1Q494R0 122 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 KLHL26Q53HC5 615 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 C16orf62Q7Z3J2 963 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 MTERF4Q7Z6M4 381 aaKnown RBP18.42■□□□□ 0.54
SS18-224ENST00000584083 ACTRT2Q8TDY3 377 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 ATP6V1G3Q96LB4 118 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 SDF2Q99470 211 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 SFXN3Q9BWM7 321 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 PINK1Q9BXM7 581 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 OR51I1Q9H343 314 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 MED17Q9NVC6 651 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 EXD2Q9NVH0 621 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 FOXD3Q9UJU5 478 aaPredicted RBP18.42■□□□□ 0.54
SS18-224ENST00000584083 GPR45Q9Y5Y3 372 aa18.42■□□□□ 0.54
SS18-224ENST00000584083 KLF11O14901 512 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 TNFRSF21O75509 655 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 NUDT14O95848 222 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 AK1P00568 194 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 ZNF17P17021 662 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 KIR2DL3P43628 341 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 KRTAP10-9P60411 292 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 RPS3AP61247 264 aaKnown RBP18.41■□□□□ 0.54
SS18-224ENST00000584083 SGCBQ16585 318 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 PLPPR5Q32ZL2 321 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 ATAD3BQ5T9A4 648 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 GOLGA6L1Q8N7Z2 621 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 PIWIL2Q8TC59 973 aaKnown RBP18.41■□□□□ 0.54
SS18-224ENST00000584083 ZBTB8AQ96BR9 441 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 OR52E6Q96RD3 313 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 BTNL2Q9UIR0 455 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 CARD8Q9Y2G2 431 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 DTNAQ9Y4J8 743 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 MPDZO75970 2070 aa18.41■□□□□ 0.54
SS18-224ENST00000584083 STX11O75558 287 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 AGR2O95994 175 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 IDO1P14902 403 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 IL12AP29459 219 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 PEX19P40855 299 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 EEF1A1P68104 462 aaKnown RBP18.4■□□□□ 0.54
SS18-224ENST00000584083 ZNF117Q03924 483 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 GPR68Q15743 365 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 ARHGAP11BQ3KRB8 267 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 SLC9B1Q4ZJI4 515 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.4■□□□□ 0.54
SS18-224ENST00000584083 EEF1A1P5Q5VTE0 462 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 OR2A2Q6IF42 318 aa18.4■□□□□ 0.54
SS18-224ENST00000584083 TNFAIP8L2Q6P589 184 aaPredicted RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms