RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 DUSP7Q16829 419 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 ZNF100Q8IYN0 542 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 RHOXF1Q8NHV9 184 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 GMEB2Q9UKD1 530 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 RASD1Q9Y272 281 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 LOC105369274A0A096LPK9 316 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 FAM171A2A8MVW0 826 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 TGM6O95932 706 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 MSX1P28360 303 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 GCAP28676 217 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 SLC6A8P48029 635 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 NIPAL3Q6P499 406 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 RANBP10Q6VN20 620 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 OR4N4Q8N0Y3 316 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 THAP3Q8WTV1 239 aaPredicted RBP13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 FRZBQ92765 325 aa13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 METTL2AQ96IZ6 378 aaKnown RBP13.71□□□□□ -0.21
CSNK1D-217ENST00000581241 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 SIM1P81133 766 aaPredicted RBP13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 MGAT3Q09327 533 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF789Q5FWF6 425 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 IL17RCQ8NAC3 791 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 RCBTB1Q8NDN9 531 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 PEX11GQ96HA9 241 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 TXNRD2Q9NNW7 524 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 CLDND1Q9NY35 253 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 KLHL13Q9P2N7 655 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 IER3IP1Q9Y5U9 82 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 NAV1Q8NEY1 1877 aa13.71□□□□□ -0.22
CSNK1D-217ENST00000581241 RAB4AP20338 218 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ARRB1P49407 418 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 TAS2R19P59542 299 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ARSJQ5FYB0 599 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 FAM69BQ5VUD6 431 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 AGAP7PQ5VUJ5 663 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 PTTG3PQ9NZH4 202 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 MYH3P11055 1940 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 P2RX6O15547 441 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 EGFP01133 1207 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 FIGLAQ6QHK4 219 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 METAP1DQ6UB28 335 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 TPRA1Q86W33 373 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 CAPNS2Q96L46 248 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 FIZ1Q96SL8 496 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 PLEKHJ1Q9NW61 149 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 C17orf113A0A1B0GUU1 675 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 K7ERQ8 282 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 GABRPO00591 440 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 DUX1O43812 170 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF43P17038 809 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 PSMB10P40306 273 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 RTL6Q6ICC9 239 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 KDELC1Q6UW63 502 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SPRED1Q7Z699 444 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 GLB1L2Q8IW92 636 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 NTMT1Q9BV86 223 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 TMEM100Q9NV29 134 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 A0A0D9SG52 128 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 GJE1A6NN92 205 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 NCR1O76036 304 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 MPIG6BO95866 241 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SNRNP70P08621 437 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 GABRB3P28472 473 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 RRAS2P62070 204 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 UNQ6126/PRO20091Q6UXV3 157 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SERPINA12Q8IW75 414 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 C16orf70Q9BSU1 422 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF888P0CJ79 500 aaPredicted RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 MC3RP41968 323 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 RPL23AP62750 156 aaKnown RBP13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 IL13RA1P78552 427 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 FAM180BQ6P0A1 224 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 TOMM40LQ969M1 308 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 ACPTQ9BZG2 426 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SLC25A31Q9H0C2 315 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
CSNK1D-217ENST00000581241 DLX5P56178 289 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 CAV3P56539 151 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 PER3P56645 1201 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 HNRNPKP61978 463 aaKnown RBP eCLIP13.69□□□□□ -0.226e-9■□□□□ 9.6
CSNK1D-217ENST00000581241 DNAJC5GQ8N7S2 189 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 ZNF443Q9Y2A4 671 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 A6NLC8 198 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 GAPDHSO14556 408 aaPredicted RBP13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 SGCEO43556 437 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 RHOP08100 348 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 OR4D6Q8NGJ1 314 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 OR51L1Q8NGJ5 315 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 TANKQ92844 425 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 CDHR4A6H8M9 788 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 LATO43561 262 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 PFKMP08237 780 aa13.69□□□□□ -0.22
CSNK1D-217ENST00000581241 IRF2P14316 349 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms