RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 CDS1Q92903 461 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 COQ8BQ96D53 544 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 TMCO6Q96DC7 493 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 PIK3IP1Q96FE7 263 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 ZC3HAV1LQ96H79 300 aaKnown RBP3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 Q96MF0 132 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 RNF145Q96MT1 663 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 TSSK3Q96PN8 268 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 CCT7Q99832 543 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 RHOXF2Q9BQY4 288 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 FAIM2Q9BWQ8 316 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 GSX2Q9BZM3 304 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 STMN4Q9H169 189 aaPredicted RBP3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 REEP4Q9H6H4 257 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 TMEM185BQ9H7F4 350 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 L2HGDHQ9H9P8 463 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC24A3Q9HC58 644 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 EQTNQ9NQ60 294 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 TAS2R9Q9NYW1 312 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 PPP4R1LQ9P1A2 415 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 ATP6V1HQ9UI12 483 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 ZDHHC2Q9UIJ5 367 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 DKKL1Q9UK85 242 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 PSME2Q9UL46 239 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 GRID1Q9ULK0 1009 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 VDAC3Q9Y277 283 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 CFL2Q9Y281 166 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 AP4B1Q9Y6B7 739 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 ARFGEF3Q5TH69 2177 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 NBEAL1Q6ZS30 2694 aa3.96□□□□□ -1.78
PPP4R1-209ENST00000578329 GOLGA8QA0A0J9YX86 632 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 A0A1W2PQD3 144 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 GOLGA8OA6NCC3 632 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CLDN24A6NM45 220 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SHISA9B4DS77 424 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 GOLGA8NF8WBI6 632 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 C16orf97H3BN30 126 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 EIF1AYO14602 144 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 TNFSF11O14788 317 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 AZIN1O14977 448 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SMAD9O15198 467 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 TYROBPO43914 113 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SEC22BO75396 215 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 LYPLA1O75608 230 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 BCAS2O75934 225 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 GOSR1O95249 250 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 HMGN2P05204 90 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 UROSP10746 265 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PRPS2P11908 318 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 POU2F1P14859 743 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CPA3P15088 417 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PRKCAP17252 672 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 KRT15P19012 456 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PSMB1P20618 241 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PTNP21246 168 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 IL12BP29460 328 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 MPIP34949 423 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PEX19P40855 299 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 RFX3P48380 749 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 RPS26P62854 115 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 RAC1P63000 192 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 RPP38P78345 283 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC25A3Q00325 362 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SPOCK1Q08629 439 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 C17orf67Q0P5P2 114 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SKP2Q13309 424 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 TNK1Q13470 666 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 HEPACAMQ14CZ8 416 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 MLC1Q15049 377 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF239Q16600 458 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 DECR1Q16698 335 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ERCC6LQ2NKX8 1250 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ARL13AQ5H913 290 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC25A53Q5H9E4 307 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SPDYAQ5MJ70 313 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 C6orf136Q5SQH8 315 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CPTPQ5TA50 214 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 RAET1LQ5VY80 246 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SHEQ5VZ18 495 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 AAGABQ6PD74 315 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PRSS57Q6UWY2 283 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CLEC9AQ6UXN8 241 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 B3GLCTQ6Y288 498 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ZNF704Q6ZNC4 412 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 IKBIPQ70UQ0 350 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 YTHDF3Q7Z739 585 aaKnown RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 TRABD2AQ86V40 505 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SLC22A9Q8IVM8 553 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CLECL1Q8IZS7 167 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 FAM71CQ8NEG0 241 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 NUP43Q8NFH3 380 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 OR4K17Q8NGC6 315 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 OR2V1Q8NHB1 315 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 CDC26Q8NHZ8 85 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 ACTRT2Q8TDY3 377 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 S100PBPQ96BU1 408 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 PERPQ96FX8 193 aa3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 SH3YL1Q96HL8 342 aaPredicted RBP3.95□□□□□ -1.78
PPP4R1-209ENST00000578329 MRGPRX4Q96LA9 322 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms