RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 GOT1L1Q8NHS2 421 aaPredicted RBP16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 ARL8AQ96BM9 186 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 MARK4Q96L34 752 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 RNF145Q96MT1 663 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 UCN2Q96RP3 112 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 SFXN3Q9BWM7 321 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 TMEM185BQ9H7F4 350 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 MED17Q9NVC6 651 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 KIAA1549Q9HCM3 1950 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 PCNX1Q96RV3 2341 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 NAV2Q8IVL1 2488 aa16.03■□□□□ 0.16
CTDNEP1-207ENST00000572043 E9PBE3 544 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 EIF1AYO14602 144 aaKnown RBP16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 HDAC3O15379 428 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 S100A3P33764 101 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 EEFSECP57772 596 aaKnown RBP16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 SIRPAP78324 504 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZNF117Q03924 483 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 PON3Q15166 354 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 SGCBQ16585 318 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 TMEM44Q2T9K0 475 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 PLPPR5Q32ZL2 321 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 GLYR1Q49A26 553 aaPredicted RBP16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 ANXA8L1Q5VT79 327 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 MISPQ8IVT2 679 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZNF527Q8NB42 609 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 VPS37AQ8NEZ2 397 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 RFWD2Q8NHY2 731 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 LINC01560Q8TB33 94 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 FNDC9Q8TBE3 224 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 TESCQ96BS2 214 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 ZFP3Q96NJ6 502 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 RBM24Q9BX46 236 aaKnown RBP16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 OR51I1Q9H343 314 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 SLC24A3Q9HC58 644 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 AIG1Q9NVV5 245 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 CARD8Q9Y2G2 431 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 AP4B1Q9Y6B7 739 aa16.02■□□□□ 0.16
CTDNEP1-207ENST00000572043 A0A087WZY1 265 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 PRSS51A0A1B0GVH4 220 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 A0A1W2PNV4 684 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 A0A1W2PQD3 144 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 TRPC5OSA6NMA1 111 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 LINC01387J3KSC0 135 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 GTPBP1O00178 669 aaKnown RBP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 SCN2BO60939 215 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 SMNDC1O75940 238 aaKnown RBP eCLIP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 NUDT14O95848 222 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 C1QCP02747 245 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 OR12D1P0DN82 309 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 IL12AP29459 219 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 CPOXP36551 454 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 EIF1AXP47813 144 aaKnown RBP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 CLNS1AP54105 237 aaKnown RBP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 SLC18A1P54219 525 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 ATP12AP54707 1039 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 OCRLQ01968 901 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 GPR68Q15743 365 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 FBXL19-AS1Q494R0 122 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 KLHL26Q53HC5 615 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 OGFOD2Q6N063 350 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 TNFAIP8L2Q6P589 184 aaPredicted RBP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 CBLN3Q6UW01 205 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 SPATA19Q7Z5L4 167 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 GGNQ86UU5 652 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 LRRC34Q8IZ02 419 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 NRGNQ92686 78 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 RAB8BQ92930 207 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 SDF2Q99470 211 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 GPATCH1Q9BRR8 931 aaKnown RBP16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 HOXD1Q9GZZ0 328 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 ACBD3Q9H3P7 528 aa16.01■□□□□ 0.15
CTDNEP1-207ENST00000572043 TNFSF12-TNFSF13A0A0A6YY99 330 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 H3BNH8 94 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 TNFRSF21O75509 655 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 CYP7B1O75881 506 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 TNFSF13O75888 250 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 ZNF17P17021 662 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 IL11P20809 199 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 UQCRC2P22695 453 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 CHI3L1P36222 383 aaPredicted RBP16■□□□□ 0.15
CTDNEP1-207ENST00000572043 RPS3AP61247 264 aaKnown RBP16■□□□□ 0.15
CTDNEP1-207ENST00000572043 FOXF1Q12946 379 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 SLC9B1Q4ZJI4 515 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 PDZK1Q5T2W1 519 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 VWA1Q6PCB0 445 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 C16orf62Q7Z3J2 963 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 CDH24Q86UP0 819 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 GTPBP8Q8N3Z3 284 aaPredicted RBP16■□□□□ 0.15
CTDNEP1-207ENST00000572043 TMCO5AQ8N6Q1 288 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 RAB3IL1Q8TBN0 382 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 POC1BQ8TC44 478 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 ACTRT2Q8TDY3 377 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 XAGE5Q8WWM1 108 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 ZBTB8AQ96BR9 441 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 ARSGQ96EG1 525 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 SLC35A5Q9BS91 424 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 INPP5KQ9BT40 448 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 HHATLQ9HCP6 504 aa16■□□□□ 0.15
CTDNEP1-207ENST00000572043 GALNT8Q9NY28 637 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms