RNA–Protein interactions for RNA: ENST00000564396.5

KLHDC4-212, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-212ENST00000564396 RNF165Q6ZSG1 346 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 BEND4Q6ZU67 534 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 GATSQ8NAP1 163 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 NUP43Q8NFH3 380 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 OR2V1Q8NHB1 315 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 FBXO30Q8TB52 745 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 RAB3IL1Q8TBN0 382 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 RNF128Q8TEB7 428 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 TMEM171Q8WVE6 324 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 ACTR6Q9GZN1 396 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 TUBB1Q9H4B7 451 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 GLRX2Q9NS18 164 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 SIRT3Q9NTG7 399 aaPredicted RBP12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 MCTS1Q9ULC4 181 aaKnown RBP12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 JMJD1CQ15652 2540 aa12.85□□□□□ -0.35
KLHDC4-212ENST00000564396 HIVEP2P31629 2446 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 OVOL3O00110 214 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 PLIN3O60664 434 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 GLRA3O75311 464 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 PRIM2P49643 509 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 CTBP2P56545 445 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 NAA20P61599 178 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 ZNF239Q16600 458 aaKnown RBP12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 PPP4R4Q6NUP7 873 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 ADAM5Q6NVV9 412 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 TFAP2EQ6VUC0 442 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 TRABD2AQ86V40 505 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 GABRG1Q8N1C3 465 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 ZNF524Q96C55 264 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 C16orf58Q96GQ5 468 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 MS4A4EQ96PG1 132 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 CCT7Q99832 543 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 SRXN1Q9BYN0 137 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 PRRG4Q9BZD6 226 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 REEP4Q9H6H4 257 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 TMEM185BQ9H7F4 350 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 OXSMQ9NWU1 459 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 C1orf109Q9NX04 203 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 TBK1Q9UHD2 729 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 GPR52Q9Y2T5 361 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 MXRA5Q9NR99 2828 aa12.84□□□□□ -0.35
KLHDC4-212ENST00000564396 CSPG4Q6UVK1 2322 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 SEC22BO75396 215 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 TUBBP07437 444 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 DANCRP0C864 163 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 LCN1P31025 176 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 GPC1P35052 558 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 PRKAG1P54619 331 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 TNK1Q13470 666 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 VPS26BQ4G0F5 336 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 RFTN2Q52LD8 501 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 CCNJQ5T5M9 372 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 HBMQ6B0K9 141 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 ATG4DQ86TL0 474 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 WFDC8Q8IUA0 241 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 OR6Y1Q8NGX8 325 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 CEP70Q8NHQ1 597 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 ABHD3Q8WU67 409 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 AKAP1Q92667 903 aaKnown RBP eCLIP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 ZBED6CLQ96FA7 236 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 OTUB1Q96FW1 271 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 SH3YL1Q96HL8 342 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 KLHL15Q96M94 604 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 C12orf49Q9H741 205 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 COQ10BQ9H8M1 238 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 LRTM1Q9HBL6 345 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 UBQLN4Q9NRR5 601 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 ACSS1Q9NUB1 689 aaPredicted RBP12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 STOML1Q9UBI4 398 aa12.83□□□□□ -0.36
KLHDC4-212ENST00000564396 LSM1O15116 133 aaKnown RBP12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 OIP5O43482 229 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 AKAP10O43572 662 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 SYNGR4O95473 234 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ELK4P28324 431 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ZNF41P51814 821 aaPredicted RBP12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 MANFP55145 182 aaKnown RBP12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ATP5J2P56134 94 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ZNF117Q03924 483 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 FOXF1Q12946 379 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 MLC1Q15049 377 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 CCDC153Q494R4 210 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 NCMAPQ5T1S8 102 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ZCCHC12Q6PEW1 402 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 CBLN3Q6UW01 205 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 CXXC5Q7LFL8 322 aaKnown RBP12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 NUFIP2Q7Z417 695 aaKnown RBP12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 MISPQ8IVT2 679 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 LILRA2Q8N149 483 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 MNS1Q8NEH6 495 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 CLHC1Q8NHS4 586 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 ROBO4Q8WZ75 1007 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 OSTF1Q92882 214 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
KLHDC4-212ENST00000564396 PPCDCQ96CD2 204 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms