RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 OR6C76A6NM76 312 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 OR5F1O95221 314 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ADAP00813 363 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 RYKP34925 604 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 PSMD4P55036 377 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 TPD52P55327 224 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 IL18R1Q13478 541 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 OR1Q1Q15612 314 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 MEP1AQ16819 746 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 CTU2Q2VPK5 515 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 KLHL26Q53HC5 615 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 DCAF12Q5T6F0 453 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 HLA-DQA1Q5Y7H0 255 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 DESI1Q6ICB0 168 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 LAIR2Q6ISS4 152 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 PAPD4Q6PIY7 484 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 SLC29A4Q7RTT9 530 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 CPEB2Q7Z5Q1 589 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 RANBP3LQ86VV4 465 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 ALDH16A1Q8IZ83 802 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 B3GNT7Q8NFL0 401 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 PITX2Q99697 317 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 COL25A1Q9BXS0 654 aaPredicted RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 FAM86C1Q9NVL1 165 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 NCDNQ9UBB6 729 aa16.63■□□□□ 0.25
COMMD4-208ENST00000563220 PPIEQ9UNP9 301 aaKnown RBP16.63■□□□□ 0.25
COMMD4-208ENST00000563220 OTOGLQ3ZCN5 2332 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 SERINC4A6NH21 518 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 TO15178 435 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 CSO75390 466 aaKnown RBP16.62■□□□□ 0.25
COMMD4-208ENST00000563220 MT-CO3P00414 261 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 MMP11P24347 488 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 CALRP27797 417 aaKnown RBP16.62■□□□□ 0.25
COMMD4-208ENST00000563220 IFNA8P32881 189 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 ACAA2P42765 397 aaKnown RBP16.62■□□□□ 0.25
COMMD4-208ENST00000563220 NR1H2P55055 460 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.25
COMMD4-208ENST00000563220 LSAMPQ13449 338 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 NLGN4XQ8N0W4 816 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 PARP8Q8N3A8 854 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 SLC38A4Q969I6 547 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 HRASLS5Q96KN8 279 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 GPA33Q99795 319 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 DGCR6LQ9BY27 220 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 ING2Q9H160 280 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 REV1Q9UBZ9 1251 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 GPN3Q9UHW5 284 aaPredicted RBP16.62■□□□□ 0.25
COMMD4-208ENST00000563220 SLC7A7Q9UM01 511 aa16.62■□□□□ 0.25
COMMD4-208ENST00000563220 A0A1W2PNU3 283 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 TMX2-CTNND1H3BSU7 103 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 ABCB7O75027 752 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 KLF7O75840 302 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 RNF4P78317 190 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 DHRS13Q6UX07 377 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PRICKLE2Q7Z3G6 844 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PIP4P1Q86T03 277 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 FBLIM1Q8WUP2 373 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 UBE2FQ969M7 185 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 ADOQ96SZ5 270 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 LRFN3Q9BTN0 628 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 UCK2Q9BZX2 261 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 RBM38Q9H0Z9 239 aaKnown RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 ANKRD19PQ9H560 264 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 AASSQ9UDR5 926 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PISDQ9UG56 409 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 NXT1Q9UKK6 140 aaKnown RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PCDHGA6Q9Y5G7 932 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 FMO6PO60774 539 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 REM1O75628 298 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 STK17BO94768 372 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 LYPD3O95274 346 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 UTS2O95399 124 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 UMODP07911 640 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 CDH15P55291 814 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 RAB15P59190 212 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 IL5RAQ01344 420 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 NDUFAF6Q330K2 333 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 C1orf94Q6P1W5 598 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 APOOLQ6UXV4 268 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 LINC00471Q8N535 108 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 LIN37Q96GY3 246 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 TAAR9Q96RI9 348 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PHOX2BQ99453 314 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 LPAR4Q99677 370 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PRSS27Q9BQR3 290 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 UBQLN4Q9NRR5 601 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PTTG2Q9NZH5 202 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 TESQ9UGI8 421 aaKnown RBP16.61■□□□□ 0.25
COMMD4-208ENST00000563220 PCDHGA1Q9Y5H4 931 aa16.61■□□□□ 0.25
COMMD4-208ENST00000563220 TRAPPC13A5PLN9 417 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 TRIM64A6NGJ6 449 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 TSPAN2O60636 221 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 LRP3O75074 770 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 CYC1P08574 325 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 IGFBP1P08833 259 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-208ENST00000563220 CHMP24386 653 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 GSSP48637 474 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 RPS6KA3P51812 740 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 UGT2B15P54855 530 aa16.6■□□□□ 0.25
COMMD4-208ENST00000563220 CDK5R2Q13319 367 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms