RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 CMIPQ8IY22 773 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 FAM83FQ8NEG4 500 aaPredicted RBP12.2□□□□□ -0.46
CDH1-204ENST00000562118 LRRC58Q96CX6 371 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 ZG16BQ96DA0 208 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 ARSGQ96EG1 525 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 C1GALT1C1Q96EU7 318 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 DTNBP1Q96EV8 351 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 TREX2Q9BQ50 279 aaPredicted RBP12.2□□□□□ -0.46
CDH1-204ENST00000562118 FAM107BQ9H098 131 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 TSPAN10Q9H1Z9 355 aaPredicted RBP12.2□□□□□ -0.46
CDH1-204ENST00000562118 CALML5Q9NZT1 146 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 PPP4R1LQ9P1A2 415 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 SPRR3Q9UBC9 169 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 PRDM4Q9UKN5 801 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 MKLN1Q9UL63 735 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 DOPEY1Q5JWR5 2465 aa12.2□□□□□ -0.46
CDH1-204ENST00000562118 NPIPA5A0A0B4J1W7 369 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 SERINC4A6NH21 518 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 NPIPA7E9PJI5 369 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 MRASO14807 208 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 NDUFB5O43674 189 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 EIF4E2O60573 245 aaKnown RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 NTN1O95631 604 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 NPIPA8P0DM63 369 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 GDF1P27539 372 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 PGM1P36871 562 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 CRATP43155 626 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 RFX3P48380 749 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 CRISP3P54108 245 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 PCBP3P57721 371 aaKnown RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 HSF1Q00613 529 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 ZNF117Q03924 483 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 SRSF1Q07955 248 aaKnown RBP eCLIP12.19□□□□□ -0.46
CDH1-204ENST00000562118 CRYZQ08257 329 aaKnown RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 SKP2Q13309 424 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 NFYCQ13952 458 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 ZNF630Q2M218 657 aaPredicted RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 EMC4Q5J8M3 183 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 PDZK1Q5T2W1 519 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 NANOGP8Q6NSW7 305 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 DUSP19Q8WTR2 217 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 RELTQ969Z4 430 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 TMEM19Q96HH6 336 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 KLHDC3Q9BQ90 382 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 SPATA9Q9BWV2 254 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 RSPO3Q9BXY4 272 aaPredicted RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 PRDM14Q9GZV8 571 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 NANOGQ9H9S0 305 aa12.19□□□□□ -0.46
CDH1-204ENST00000562118 EXOSC3Q9NQT5 275 aaKnown RBP12.19□□□□□ -0.46
CDH1-204ENST00000562118 MED12Q93074 2177 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 A0A087WZY1 265 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 TRGV5A0A0B4J1U4 118 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 A0A0G2JPF8 293 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 A0A1B0GTH9 108 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 EVPLLA8MZ36 301 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 HNRNPCL2B2RXH8 293 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 HNRNPCL3B7ZW38 293 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 OIP5O43482 229 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC19A2O60779 497 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
CDH1-204ENST00000562118 DCTN3O75935 186 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 THBS1P07996 1170 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 HNRNPCL4P0DMR1 293 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 NID1P14543 1247 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 ETS2P15036 469 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 ZNF17P17021 662 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC6A2P23975 617 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 CHMP24386 653 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 PSMA4P25789 261 aaKnown RBP12.18□□□□□ -0.46
CDH1-204ENST00000562118 CA7P43166 264 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 RBBP4Q09028 425 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 GNA13Q14344 377 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 GPR68Q15743 365 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC25A53Q5H9E4 307 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 RNF220Q5VTB9 566 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 VASNQ6EMK4 673 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 CBLN3Q6UW01 205 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 GRAMD2AQ8IUY3 354 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 PCYOX1LQ8NBM8 494 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 FAM57AQ8TBR7 257 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC35B4Q969S0 331 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 CMTM5Q96DZ9 223 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 JSRP1Q96MG2 331 aaPredicted RBP12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC39A3Q9BRY0 314 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 LAT2Q9GZY6 243 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 DEFB127Q9H1M4 99 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC6A15Q9H2J7 730 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 DSN1Q9H410 356 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.18□□□□□ -0.46
CDH1-204ENST00000562118 SLC35A3Q9Y2D2 325 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 CHST2Q9Y4C5 530 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
CDH1-204ENST00000562118 LOC100653049A0A140TA62 436 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 WIPF3A6NGB9 483 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 LINC01387J3KSC0 135 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 FAAHO00519 579 aa12.17□□□□□ -0.46
CDH1-204ENST00000562118 BCKDKO14874 412 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms