RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CLDN4O14493 209 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 BCKDKO14874 412 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 OR10H2O60403 315 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 COQ9O75208 318 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 UGT2B11O75310 529 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 BCAS1O75363 584 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 STX11O75558 287 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CDC123O75794 336 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 UGT2B17O75795 530 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RGS9O75916 674 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SOX30O94993 753 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CCNB2O95067 398 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 KCNK2O95069 426 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 GADD45GO95257 159 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 DDAH2O95865 285 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 AK1P00568 194 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 GASTP01350 101 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 H1F0P07305 194 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SYPP08247 313 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 HTR1AP08908 422 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ANXA8P13928 327 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 GABRB1P18505 474 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ELK4P28324 431 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 GABRA3P34903 492 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TRHRP34981 398 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ARL4DP49703 201 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 HLCSP50747 726 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RPS6KA3P51812 740 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ARHGDIAP52565 204 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CDH15P55291 814 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TUBA4AP68366 448 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RPP38P78345 283 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 POU6F2P78424 691 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZFP36L1Q07352 338 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 STX4Q12846 297 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 NPRL3Q12980 569 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CDK5R2Q13319 367 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SERTAD2Q14140 314 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CSRP2Q16527 193 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CCDC157Q569K6 752 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF311Q5JNZ3 666 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 C6orf141Q5SZD1 244 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RNF220Q5VTB9 566 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 KRT80Q6KB66 452 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RHBDD2Q6NTF9 364 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PGBD2Q6P3X8 592 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PODNL1Q6PEZ8 512 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CD300LDQ6UXZ3 194 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF836Q6ZNA1 936 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 C16orf62Q7Z3J2 963 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 APLFQ8IW19 511 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF619Q8N2I2 560 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF321PQ8N8H1 164 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 BMPERQ8N8U9 685 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ATG16L2Q8NAA4 619 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PLPP5Q8NEB5 264 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TSPAN14Q8NG11 270 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 OR7G1Q8NGA0 311 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 OR4N2Q8NGD1 307 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 OR52J3Q8NH60 311 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 C16orf52Q8NHV5 167 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 VANGL1Q8TAA9 524 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 IFI44Q8TCB0 444 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SLC7A13Q8TCU3 470 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TSLPQ969D9 159 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF566Q969W8 418 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RMND5BQ96G75 393 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 HRASLS5Q96KN8 279 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CNDP2Q96KP4 475 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CCDC74BQ96LY2 380 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PRRC1Q96M27 445 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 DGAT2Q96PD7 388 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ALPK1Q96QP1 1244 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SIGLEC11Q96RL6 698 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 GPA33Q99795 319 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PELOQ9BRX2 385 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 NDC1Q9BTX1 674 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 DGCR6LQ9BY27 220 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RBM38Q9H0Z9 239 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF304Q9HCX3 659 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TMEM9BQ9NQ34 198 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 KRT84Q9NSB2 600 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 RXFP3Q9NSD7 469 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 TUBA8Q9NY65 449 aaPredicted RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 FTSJ1Q9UET6 329 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SERTAD3Q9UJW9 196 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 CDC14AQ9UNH5 594 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 SLC9A8Q9Y2E8 581 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 NTNG1Q9Y2I2 539 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 IFT52Q9Y366 437 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 FAM32AQ9Y421 112 aaKnown RBP6.04□□□□□ -1.44
CAPN3-210ENST00000561817 WDR45Q9Y484 360 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PCDHGB2Q9Y5G2 931 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 PCDHGA6Q9Y5G7 932 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 HSPE1-MOB4S4R3N1 261 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 MYO15AQ9UKN7 3530 aa6.04□□□□□ -1.44
CAPN3-210ENST00000561817 NPIPA5A0A0B4J1W7 369 aa6.03□□□□□ -1.44
CAPN3-210ENST00000561817 CDHR4A6H8M9 788 aa6.03□□□□□ -1.44
CAPN3-210ENST00000561817 VSTM2BA6NLU5 285 aa6.03□□□□□ -1.44
CAPN3-210ENST00000561817 ZAR1LA6NP61 321 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms