RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF350Q9GZX5 532 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 QRSL1Q9H0R6 528 aaKnown RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 RUBCNLQ9H714 662 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 DKKL1Q9UK85 242 aa12.59□□□□□ -0.39
TPM1-230ENST00000561266 MRPS18CQ9Y3D5 142 aaKnown RBP12.59□□□□□ -0.39
TPM1-230ENST00000561266 A0A1W2PQD3 144 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 UGT2B17O75795 530 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 CHRM4P08173 479 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 VIMP08670 466 aaKnown RBP12.58□□□□□ -0.4
TPM1-230ENST00000561266 NUDT7P0C024 238 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 ZCCHC18P0CG32 403 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 ETFAP13804 333 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 HK1P19367 917 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 LCN1P31025 176 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 DSCR4P56555 118 aaPredicted RBP12.58□□□□□ -0.4
TPM1-230ENST00000561266 PER3P56645 1201 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 CLDN18P56856 261 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 STX1BP61266 288 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 CHRNEQ04844 493 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 C17orf67Q0P5P2 114 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 SQLEQ14534 574 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 TOMM34Q15785 309 aaPredicted RBP12.58□□□□□ -0.4
TPM1-230ENST00000561266 HSP90B2PQ58FF3 399 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 AP1ARQ63HQ0 302 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 MSANTD1Q6ZTZ1 278 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 LIX1LQ8IVB5 337 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 POC1BQ8TC44 478 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 ITCHQ96J02 903 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 RSPO3Q9BXY4 272 aaPredicted RBP12.58□□□□□ -0.4
TPM1-230ENST00000561266 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 IKZF5Q9H5V7 419 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 TPT1P8Q9HAU6 139 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 SUCOQ9UBS9 1254 aaKnown RBP12.58□□□□□ -0.4
TPM1-230ENST00000561266 CAMK2AQ9UQM7 478 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 CARD8Q9Y2G2 431 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 ZNF337Q9Y3M9 751 aa12.58□□□□□ -0.4
TPM1-230ENST00000561266 TRBV5-3A0A0A0MS03 114 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 A0A0G2JNJ9 132 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 OR2M5A3KFT3 312 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 DUXAA6NLW8 204 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 CLDN24A6NM45 220 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 C19orf84I3L1E1 186 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 SCDO00767 359 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 EFNA2O43921 213 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 KIAA0513O60268 411 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 H6PDO95479 791 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 IL11P20809 199 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 ATP6V1C1P21283 382 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 PSMA4P25789 261 aaKnown RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 CLK3P49761 638 aaKnown RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 KHKP50053 298 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 SUCLG1P53597 346 aaKnown RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 SRYQ05066 204 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 ZNF141Q15928 474 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 ACSF3Q4G176 576 aaPredicted RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 C6orf10Q5SRN2 563 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 MAMDC2Q7Z304 686 aaPredicted RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 C16orf62Q7Z3J2 963 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 RETREG3Q86VR2 466 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 IFNEQ86WN2 208 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 ZNF808Q8N4W9 903 aaPredicted RBP12.57□□□□□ -0.4
TPM1-230ENST00000561266 NAXEQ8NCW5 288 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 PHOSPHO1Q8TCT1 267 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 SFXN2Q96NB2 322 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 TUBA1CQ9BQE3 449 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 TRIM8Q9BZR9 551 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 NMUR2Q9GZQ4 415 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 SLC38A1Q9H2H9 487 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 VAPAQ9P0L0 249 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 Q9UFV3 132 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 ICAM5Q9UMF0 924 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 VDAC3Q9Y277 283 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 DTNAQ9Y4J8 743 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 PCDHGB3Q9Y5G1 929 aa12.57□□□□□ -0.4
TPM1-230ENST00000561266 A0A096LPI6 279 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 ADAM11O75078 769 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 WDR1O75083 606 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 STX11O75558 287 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 ACTL6AO96019 429 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 OPN1LWP04000 364 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 CPN1P15169 458 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 ZNF708P17019 499 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 CLDN20P56880 219 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 LRRC74AQ0VAA2 488 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 PLPPR5Q32ZL2 321 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 LRIF1Q5T3J3 769 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 DLEU7Q6UYE1 221 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 B3GNT6Q6ZMB0 384 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 TNIP2Q8NFZ5 429 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 B4GALNT2Q8NHY0 566 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 C10orf82Q8WW14 230 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 SDCCAG3Q96C92 435 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 UCK2Q9BZX2 261 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 RMND5AQ9H871 391 aa12.56□□□□□ -0.4
TPM1-230ENST00000561266 MED17Q9NVC6 651 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms