RNA–Protein interactions for RNA: ENST00000559119.1

VPS13C-208, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 2

Gene VPS13C, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-208ENST00000559119 TYROBPO43914 113 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZNF324O75467 553 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZNF189O75820 626 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 MMP23AO75900 390 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ATP5HO75947 161 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 EPOP01588 193 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZFYP08048 801 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 WNT2P09544 360 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 H2AFZP0C0S5 128 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 IGHV1-2P23083 117 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 GABRR1P24046 479 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 HTR1FP30939 366 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 STIP1P31948 543 aaKnown RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 HSPA9P38646 679 aaKnown RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZNF41P51814 821 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 NDUFA8P51970 172 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 SLC34A1Q06495 639 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 HSPA14Q0VDF9 509 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 SCARB2Q14108 478 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 PPP1R7Q15435 360 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 BCL2A1Q16548 175 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 PARP6Q2NL67 630 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CCDC152Q4G0S7 254 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CYB5R2Q6BCY4 276 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 STEAP1BQ6NZ63 245 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 FAM173BQ6P4H8 233 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 BLOC1S2Q6QNY1 142 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 NCCRP1Q6ZVX7 275 aaPredicted RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ASRGL1Q7L266 308 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CROCCP2Q86T23 111 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CCDC65Q8IXS2 484 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 IFT20Q8IY31 132 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 NECAB1Q8N987 351 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 BBS1Q8NFJ9 593 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 IFT81Q8WYA0 676 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 FAM162AQ96A26 154 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CHMP6Q96FZ7 201 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 IFT74Q96LB3 600 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 TMEM237Q96Q45 408 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CGREF1Q99674 301 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 HCAR1Q9BXC0 346 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 GPR174Q9BXC1 333 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 RAB17Q9H0T7 212 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 GLT8D2Q9H1C3 349 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 CENPMQ9NSP4 180 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZNHIT6Q9NWK9 470 aaKnown RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 AATFQ9NY61 560 aaKnown RBP eCLIP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 TEKT2Q9UIF3 430 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 PSORS1C1Q9UIG5 152 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 SLC9A8Q9Y2E8 581 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 BZW2Q9Y6E2 419 aaKnown RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ATP7AQ04656 1500 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ATP10BO94823 1461 aa2.5□□□□□ -2.01
VPS13C-208ENST00000559119 ZCCHC11Q5TAX3 1644 aaKnown RBP2.5□□□□□ -2.01
VPS13C-208ENST00000559119 TMEM94Q12767 1356 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 ADGRB3O60242 1522 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.49□□□□□ -2.01
VPS13C-208ENST00000559119 SYCP2Q9BX26 1530 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 A0A0A6YYD4 124 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 LRCOL1A6NCL2 159 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 OR7A17O14581 309 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 TTI1O43156 1089 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 BAG2O95816 211 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 FCER2P06734 321 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CLTAP09496 248 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CCNB1P14635 433 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CYP11B1P15538 503 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 TCP1P17987 556 aaKnown RBP2.49□□□□□ -2.01
VPS13C-208ENST00000559119 S100A1P23297 94 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 ATP5DP30049 168 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 AXLP30530 894 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 TCF7P36402 384 aaPredicted RBP2.49□□□□□ -2.01
VPS13C-208ENST00000559119 PMELP40967 661 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 RPL26P61254 145 aaKnown RBP2.49□□□□□ -2.01
VPS13C-208ENST00000559119 NCALDP61601 193 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CDKL1Q00532 357 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 SCN1BQ07699 218 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 BNIP1Q12981 228 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 INAQ16352 499 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CCDC153Q494R4 210 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CFAP157Q5JU67 520 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 APTXQ7Z2E3 356 aaKnown RBP2.49□□□□□ -2.01
VPS13C-208ENST00000559119 TRPM8Q7Z2W7 1104 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 GPR142Q7Z601 462 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 MCOLN2Q8IZK6 566 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 SYCP3Q8IZU3 236 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 LINC00518Q8N0U6 118 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 THEM5Q8N1Q8 247 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 LYPD1Q8N2G4 141 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 TMCO5AQ8N6Q1 288 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 OR10H4Q8NGA5 316 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 FBXO30Q8TB52 745 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 DEPDC1BQ8WUY9 529 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 DYDC1Q8WWB3 177 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 RAPGEF5Q92565 580 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 LRRC45Q96CN5 670 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 C8orf76Q96K31 380 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 CATSPER2Q96P56 530 aa2.49□□□□□ -2.01
VPS13C-208ENST00000559119 OLFM3Q96PB7 478 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms