RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ATL3Q6DD88 541 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 FAM72DQ6L9T8 149 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 FAM71F2Q6NXP2 309 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 STOX1Q6ZVD7 989 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 NLRP9Q7RTR0 991 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 TRPM8Q7Z2W7 1104 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 MOB3BQ86TA1 216 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 FAM72BQ86X60 149 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 LRRC49Q8IUZ0 686 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 DCUN1D3Q8IWE4 304 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 CLEC4FQ8N1N0 589 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 LINC01561Q8N1V8 128 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF491Q8N8L2 437 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ZSCAN4Q8NAM6 433 aaPredicted RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 SUMF1Q8NBK3 374 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 AQP11Q8NBQ7 271 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 NUP37Q8NFH4 326 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 RAB3IL1Q8TBN0 382 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF501Q96CX3 271 aaPredicted RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 MOCOSQ96EN8 888 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 C7orf34Q96L11 122 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 F2RL3Q96RI0 385 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 SLC6A7Q99884 636 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 BCL7BQ9BQE9 202 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 FEM1AQ9BSK4 669 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 CABLES2Q9BTV7 478 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 RBM4Q9BWF3 364 aaKnown RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 TSSK1BQ9BXA7 367 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 DUSP16Q9BY84 665 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 STRADBQ9C0K7 418 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 FAM192AQ9GZU8 254 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 NXF5Q9H1B4 397 aaKnown RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 PNNQ9H307 717 aaKnown RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 LRRN3Q9H3W5 708 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 IKZF5Q9H5V7 419 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 MOB1AQ9H8S9 216 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ELL3Q9HB65 397 aaPredicted RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 MCCC2Q9HCC0 563 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 SDF2L1Q9HCN8 221 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 POLE4Q9NR33 117 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 SLC17A5Q9NRA2 495 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ZDHHC18Q9NUE0 388 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 RAB20Q9NX57 234 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 UBAP1Q9NZ09 502 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 TMEM181Q9P2C4 612 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 GALPQ9UBC7 116 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 MGAT4AQ9UM21 535 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 STK38LQ9Y2H1 464 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 TIMM10BQ9Y5J6 103 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 ALG6Q9Y672 507 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 WDR81Q562E7 1941 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
TRAV28-201ENST00000557548 BRD4O60885 1362 aaPredicted RBP2.61□□□□□ -1.99
TRAV28-201ENST00000557548 IGKV2D-30A0A075B6S6 120 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 LOC100653049A0A140TA62 436 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 GOLGA6L7A0A1B0GV03 622 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 A0A1W2PNV4 684 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 LRP5LA4QPB2 252 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ARHGEF33A8MVX0 844 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 K7EQG2 157 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 NDUFS8O00217 210 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 DNALI1O14645 258 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ZNF254O75437 659 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 FLOT1O75955 427 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 KRT34O76011 436 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 DUS4LO95620 317 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 FGFR1OPO95684 399 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 NUDT14O95848 222 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 S100A6P06703 90 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 FGF4P08620 206 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 HBQ1P09105 142 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 WNT2P09544 360 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PABPC4LP0CB38 370 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 UBTFL6P0CB48 400 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 HSD17B1P14061 328 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 POU2F1P14859 743 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ACADSP16219 412 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 MMP11P24347 488 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ATP5A1P25705 553 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 LONP1P36776 959 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 P2RY1P47900 373 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 EMDP50402 254 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 AP3M2P53677 418 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 MFAP2P55001 183 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CDH4P55283 916 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 GSTO1P78417 241 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SRPXP78539 464 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 FKBP3Q00688 224 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 OC90Q02509 493 aaPredicted RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CSTF1Q05048 431 aaKnown RBP2.6□□□□□ -1.99
TRAV28-201ENST00000557548 TGM3Q08188 693 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 C1orf61Q13536 156 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PEX6Q13608 980 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 ZIC1Q15915 447 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 PCK2Q16822 640 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 SLC5A12Q1EHB4 618 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 TMEM44Q2T9K0 475 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 BCL7AQ4VC05 210 aa2.6□□□□□ -1.99
TRAV28-201ENST00000557548 CTSL3PQ5NE16 218 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms