RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 HEATR5AQ86XA9 2040 aa7.77□□□□□ -1.17
VRK1-206ENST00000557222 A0A087WZY1 265 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GNG14A0A1W2PPG7 69 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 TRIM64A6NGJ6 449 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 TRIM64BA6NI03 449 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 INAFM1C9JVW0 142 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PPP6CO00743 305 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 SS18L1O75177 396 aaPredicted RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 SOX30O94993 753 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 OR4F21O95013 312 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PGRP06401 933 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 ENO1P06733 434 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 NGFRP08138 427 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 SBK3P0C264 359 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 HMOX2P30519 316 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 LCN1P31025 176 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 TIA1P31483 386 aaKnown RBP eCLIP7.76□□□□□ -1.171e-12■■■□□ 17.1
VRK1-206ENST00000557222 CDH13P55290 713 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PKNOX1P55347 436 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 NAA20P61599 178 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 SIRPAP78324 504 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PRR5P85299 388 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 TAGLNQ01995 201 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 PON3Q15166 354 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 ZNHIT3Q15649 155 aaPredicted RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 ZNF678Q5SXM1 525 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 LGSNQ5TDP6 509 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GTF2IRD2BQ6EKJ0 949 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 ADAM5Q6NVV9 412 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 FAM180BQ6P0A1 224 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 ZNF704Q6ZNC4 412 aaPredicted RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 TIFABQ6ZNK6 161 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GPRIN3Q6ZVF9 776 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GTF2IRD2Q86UP8 949 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 MRPL41Q8IXM3 137 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 OR2L13Q8N349 312 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 MFSD4AQ8N468 514 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 CDYL2Q8N8U2 506 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 OR4N2Q8NGD1 307 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 METTL6Q8TCB7 284 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 DUSP19Q8WTR2 217 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 EXOSC8Q96B26 276 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 METTL2AQ96IZ6 378 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 LMF2Q9BU23 707 aaKnown RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 HDHD5Q9BXW7 423 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 ACPTQ9BZG2 426 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GRPEL1Q9HAV7 217 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 NINJ2Q9NZG7 142 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 MED11Q9P086 117 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 GPR52Q9Y2T5 361 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 SNX8Q9Y5X2 465 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.76□□□□□ -1.17
VRK1-206ENST00000557222 NBEAL1Q6ZS30 2694 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PCNX3Q9H6A9 2034 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 PRR14LQ5THK1 2151 aa7.76□□□□□ -1.17
VRK1-206ENST00000557222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 C7orf72A4D263 438 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 H3BQF6 201 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 UPK1AO00322 258 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 HS3ST1O14792 307 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ADAMDEC1O15204 470 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 SCO2O43819 266 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 CRLF1O75462 422 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 SUPT7LO94864 414 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 THBDP07204 575 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 SNRPAP09012 282 aaKnown RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 ANXA4P09525 319 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 CTAGE8P0CG41 777 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 PSMB1P20618 241 aaKnown RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 IMPDH1P20839 514 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ATP5F1P24539 256 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 CASQ1P31415 396 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 CTBP2P56545 445 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 CLDN20P56880 219 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ZNF763Q0D2J5 394 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ZNF155Q12901 538 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 SGCBQ16585 318 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.75□□□□□ -1.17
VRK1-206ENST00000557222 UNC50Q53HI1 259 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 HEPHL1Q6MZM0 1159 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 STAC2Q6ZMT1 411 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ZNF550Q7Z398 422 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 STK32CQ86UX6 486 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 SLC22A9Q8IVM8 553 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 WDR75Q8IWA0 830 aaKnown RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 CTAGE4Q8IX94 777 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 GTPBP8Q8N3Z3 284 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 POU5F2Q8N7G0 328 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 STEAP2Q8NFT2 490 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.75□□□□□ -1.17
VRK1-206ENST00000557222 ACTRT2Q8TDY3 377 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 HOXB13Q92826 284 aaPredicted RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 ZBTB8AQ96BR9 441 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 ZC3HAV1LQ96H79 300 aaKnown RBP7.75□□□□□ -1.17
VRK1-206ENST00000557222 PAFAH2Q99487 392 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 PRRG4Q9BZD6 226 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 TBL1XR1Q9BZK7 514 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 KLHL4Q9C0H6 718 aa7.75□□□□□ -1.17
VRK1-206ENST00000557222 IQCGQ9H095 443 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms