RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 C1QTNF9P0C862 333 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 UBTFL6P0CB48 400 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 SLC7A1P30825 629 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 KCNJ5P48544 419 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ERFP50548 548 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF41P51814 821 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ARHGDIAP52565 204 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 SMIM11AP58511 58 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 CXADRP78310 365 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ELF3P78545 371 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 C17orf67Q0P5P2 114 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 RAPSNQ13702 412 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 CBFBQ13951 182 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 CCNIQ14094 377 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ZNF791Q3KP31 576 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 B3GNTL1Q67FW5 361 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 TMEM81Q6P7N7 255 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 INO80CQ6PI98 192 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 DEF8Q6ZN54 512 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 C16orf47Q6ZP98 133 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 VRK2Q86Y07 508 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ZDHHC21Q8IVQ6 265 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 ZADH2Q8N4Q0 377 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 OR10G3Q8NGC4 313 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 KRCC1Q9NPI7 259 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 EXOSC3Q9NQT5 275 aaKnown RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 BOKQ9UMX3 212 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 PCDHGB7Q9Y5F8 929 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 PCDHGA9Q9Y5G4 932 aaKnown RBP10.28□□□□□ -0.76
SHMT2-220ENST00000555634 EML6Q6ZMW3 1958 aa10.28□□□□□ -0.76
SHMT2-220ENST00000555634 A0A087WV48 116 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TCRBV5S2A0A599 114 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 MED19A0JLT2 244 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TMEM200CA6NKL6 621 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ACOT7O00154 380 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TPST1O60507 370 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 EIF4E2O60573 245 aaKnown RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 E2F6O75461 281 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ANGPTL1O95841 491 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 WT1P19544 449 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 PGCP20142 388 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 FASP25445 335 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ELAVL4P26378 380 aaKnown RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 MSX1P28360 303 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 GCKP35557 465 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ADH7P40394 386 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TAS2R41P59536 307 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 EEF1A1P68104 462 aaKnown RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TUBA3CQ13748 450 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 OR1C1Q15619 314 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 MAPK11Q15759 364 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 KLHL26Q53HC5 615 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TUBA3EQ6PEY2 450 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ENPP6Q6UWR7 440 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 PLEKHM3Q6ZWE6 761 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 HMGN2P46Q86SG4 172 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 CARM1Q86X55 608 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 GRAMD2AQ8IUY3 354 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 GATSQ8NAP1 163 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 POGLUT1Q8NBL1 392 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 PSD4Q8NDX1 1056 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 OR4K17Q8NGC6 315 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 B4GALNT2Q8NHY0 566 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF563Q8TA94 476 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 PYDC1Q8WXC3 89 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 TMEM234Q8WY98 164 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 HGDQ93099 445 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ZNF559Q9BR84 538 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 VCXQ9H320 206 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 VCX3BQ9H321 246 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 DCLRE1BQ9H816 532 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 CPNE5Q9HCH3 593 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 CCM2LQ9NUG4 571 aaPredicted RBP10.27□□□□□ -0.77
SHMT2-220ENST00000555634 FBXO34Q9NWN3 711 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 ANKRD10Q9NXR5 420 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 PRDM4Q9UKN5 801 aa10.27□□□□□ -0.77
SHMT2-220ENST00000555634 NPIPB9F8W1W9 429 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 KLRC4-KLRK1H3BQV0 150 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 hCG_2039718K7EN88 272 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 MASP2O00187 686 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 FMO6PO60774 539 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 DNAJB5O75953 348 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 BAG2O95816 211 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 LGI1O95970 557 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 LDLRP01130 860 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 ITPKBP27987 946 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 GK3PQ14409 553 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 GANABQ14697 944 aaKnown RBP10.26□□□□□ -0.77
SHMT2-220ENST00000555634 RCN1Q15293 331 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 PRAMEF20Q5VT98 475 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 AP1ARQ63HQ0 302 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 OLIG3Q7RTU3 272 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 VTCN1Q7Z7D3 282 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 ZAR1Q86SH2 424 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 ADGRG5Q8IZF4 528 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 PIK3C3Q8NEB9 887 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 FDCSPQ8NFU4 85 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 OR4C3Q8NH37 302 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 RNF217Q8TC41 542 aa10.26□□□□□ -0.77
SHMT2-220ENST00000555634 GRHL3Q8TE85 626 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms