RNA–Protein interactions for RNA: ENST00000555608.5

EFCAB11-207, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2

Gene EFCAB11, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-207ENST00000555608 SMU1Q2TAY7 513 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 PLPPR5Q32ZL2 321 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 NDUFAF6Q330K2 333 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 GGNQ86UU5 652 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 ANKRD46Q86W74 232 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 ZNF614Q8N883 585 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 CNEP1R1Q8N9A8 125 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 OR4A15Q8NGL6 344 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 FNDC9Q8TBE3 224 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 PHOSPHO1Q8TCT1 267 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 SLC35G5Q96KT7 338 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 RNF145Q96MT1 663 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 TMEM185BQ9H7F4 350 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 UBQLN4Q9NRR5 601 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 MED17Q9NVC6 651 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 MARCOQ9UEW3 520 aaPredicted RBP13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 HAO1Q9UJM8 370 aa13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 FOXD3Q9UJU5 478 aaPredicted RBP13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.38□□□□□ -0.27
EFCAB11-207ENST00000555608 TUBAL3A6NHL2 446 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 A6NNC1 897 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 C9JVG2 144 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 EIF1AYO14602 144 aaKnown RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 CTAG2O75638 210 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 SMNDC1O75940 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 CPSF4O95639 269 aaKnown RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 LBPP18428 481 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 ZNF41P51814 821 aaPredicted RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 NME5P56597 212 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 FOXF1Q12946 379 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 GLYR1Q49A26 553 aaPredicted RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 CROCCP2Q86T23 111 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 NATD1Q8N6N6 113 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 METTL25Q8N6Q8 603 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 GOT1L1Q8NHS2 421 aaPredicted RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 B4GALNT2Q8NHY0 566 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 POC1BQ8TC44 478 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 MOAP1Q96BY2 351 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 POLDIP3Q9BY77 421 aaKnown RBP13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 ACBD3Q9H3P7 528 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 LIME1Q9H400 295 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 MEAF6Q9HAF1 191 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 PACSIN3Q9UKS6 424 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 AP4B1Q9Y6B7 739 aa13.37□□□□□ -0.27
EFCAB11-207ENST00000555608 A0A1W2PQD3 144 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 SDHDO14521 159 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 ANKRD28O15084 1053 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 TNFRSF21O75509 655 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 TUBBP07437 444 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 KRT16P08779 473 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 ALDOCP09972 364 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 KITP10721 976 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 ZNF17P17021 662 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 IL11P20809 199 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 MATN1P21941 496 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 LCN1P31025 176 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 PEX19P40855 299 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 EIF1AXP47813 144 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 MAGOHP61326 146 aaKnown RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 PHC1P78364 1004 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 SPANXN4Q5MJ08 99 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 CBLN3Q6UW01 205 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 C6orf120Q7Z4R8 191 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 KIF18BQ86Y91 864 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 FAM222BQ8WU58 562 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 STARD4Q96DR4 205 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 ARSGQ96EG1 525 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 CLEC4MQ9H2X3 399 aaPredicted RBP13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 PIGMQ9H3S5 423 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 RASSF1Q9NS23 344 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 CARD8Q9Y2G2 431 aa13.36□□□□□ -0.27
EFCAB11-207ENST00000555608 POLQO75417 2590 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 ANKRD17O75179 2603 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 A0A087WZY1 265 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 GOLGA8QA0A0J9YX86 632 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 CENPVL1A0A0U1RR11 272 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 GOLGA8OA6NCC3 632 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 GOLGA8NF8WBI6 632 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 LINC01387J3KSC0 135 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 RNASET2O00584 256 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 TNFSF11O14788 317 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SCN2BO60939 215 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 ERLIN1O75477 346 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 AQP8O94778 261 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 NUDT14O95848 222 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 C1QCP02747 245 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 PSMA4P25789 261 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SHC1P29353 583 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 DNAJA1P31689 397 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SLC6A8P48029 635 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 EEFSECP57772 596 aaKnown RBP13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SORDQ00796 357 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 POU4F3Q15319 338 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 SGCBQ16585 318 aa13.35□□□□□ -0.27
EFCAB11-207ENST00000555608 CTU2Q2VPK5 515 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms