RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CMIPQ8IY22 773 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 KBTBD2Q8IY47 623 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 HS3ST5Q8IZT8 346 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PACRGLQ8N7B6 248 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 OR5M3Q8NGP4 307 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 OR52J3Q8NH60 311 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PHOSPHO1Q8TCT1 267 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 MAGEE2Q8TD90 523 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PHF10Q8WUB8 498 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 DNAJC9Q8WXX5 260 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 NR4A3Q92570 626 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 NACC2Q96BF6 587 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PRRC1Q96M27 445 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 EPYCQ99645 322 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF184Q99676 751 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PRR14Q9BWN1 585 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 CDCP1Q9H5V8 836 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 EVA1AQ9H8M9 152 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PDP1Q9P0J1 537 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 MYOTQ9UBF9 498 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PRDM4Q9UKN5 801 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 CNOT11Q9UKZ1 510 aaKnown RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 TMCC3Q9ULS5 477 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 SLC35A3Q9Y2D2 325 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 PCDHGA6Q9Y5G7 932 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 MAGED1Q9Y5V3 778 aaPredicted RBP8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 LYVE1Q9Y5Y7 322 aa8.88□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF292O60281 2723 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TRABD2BA6NFA1 517 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 OR6C70A6NIJ9 312 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TMEM200CA6NKL6 621 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 H3BNH8 94 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 FFAR1O14842 300 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TPST2O60704 377 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 UGT2B11O75310 529 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 OR2J2O76002 312 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 DXOO77932 396 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 UBTFL6P0CB48 400 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 UBL4AP11441 157 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 PRG2P13727 222 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 LIFP15018 202 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF26P17031 533 aaPredicted RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NAGAP17050 411 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TMED10P49755 219 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 CLK3P49761 638 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 FBXW4P57775 412 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ATP1A4Q13733 1029 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 LAPTM4AQ15012 233 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TAF11Q15544 211 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 EXOC3L2Q2M3D2 409 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NDUFAF6Q330K2 333 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 KLHL26Q53HC5 615 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 COLEC12Q5KU26 742 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ENTPD8Q5MY95 495 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 FCRLBQ6BAA4 426 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF550Q7Z398 422 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NUP54Q7Z3B4 507 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF605Q86T29 641 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 VASH2Q86V25 355 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 GRAMD2AQ8IUY3 354 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 SLC15A4Q8N697 577 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TMCO5AQ8N6Q1 288 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 PIK3C3Q8NEB9 887 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 RNF217Q8TC41 542 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 GIPC3Q8TF64 312 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 OIT3Q8WWZ8 545 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TMCO6Q96DC7 493 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NXPE2Q96DL1 559 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NRBF2Q96F24 287 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 IP6K3Q96PC2 410 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 BARD1Q99728 777 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF559Q9BR84 538 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 TBL1XR1Q9BZK7 514 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 SMURF2Q9HAU4 748 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 C8orf4Q9NR00 106 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 ACER3Q9NUN7 267 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 DNAJB12Q9NXW2 375 aaKnown RBP8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 KIF17Q9P2E2 1029 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 A4GNTQ9UNA3 340 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 NTNG1Q9Y2I2 539 aa8.87□□□□□ -0.99
HNRNPC-220ENST00000555585 EXPH5Q8NEV8 1989 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 A0A1W2PQD3 144 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF264O43296 627 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 NDUFB5O43674 189 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 SCO2O43819 266 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF354AO60765 605 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 SEMA7AO75326 666 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 BCAS1O75363 584 aaPredicted RBP8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ITGA10O75578 1167 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 CCNB2O95067 398 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 SERPINA7P05543 415 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ELAVL4P26378 380 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 RYKP34925 604 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ADH7P40394 386 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 HSPA13P48723 471 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ST13P50502 369 aaKnown RBP8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 SSR4P51571 173 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ALDH3A2P51648 485 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 CCR4P51679 360 aa8.86□□□□□ -0.99
HNRNPC-220ENST00000555585 ZNF136P52737 540 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms