RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 OR7A17O14581 309 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SIGLEC5O15389 551 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 EFNA2O43921 213 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SRPX2O60687 465 aaPredicted RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 KRT34O76011 436 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SORBS2O94875 1100 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 FTH1P02794 183 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 FHP07954 510 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 FRMD6-AS1P0C7T7 363 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 PPIAL4FP0DN26 164 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 DPEP1P16444 411 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TBXA2RP21731 343 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 LONP1P36776 959 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 NAMPTP43490 491 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 STARP49675 285 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 ATP1B3P54709 279 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 CDH6P55285 790 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 HERV-K104P61576 105 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 XIAPP98170 497 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 BST2Q10589 180 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 SRSF9Q13242 221 aaKnown RBP eCLIP4.43□□□□□ -1.7
VRK1-203ENST00000555067 C1orf61Q13536 156 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 GK3PQ14409 553 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TGFBIQ15582 683 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 CHRNA6Q15825 494 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 MICBQ29980 383 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 MTHFSDQ2M296 383 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 SPANXN4Q5MJ08 99 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 WLSQ5T9L3 541 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 DDI2Q5TDH0 399 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 FAM71F2Q6NXP2 309 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TMEM53Q6P2H8 277 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 METTL7BQ6UX53 244 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 VITQ6UXI7 678 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 ZNF730Q6ZMV8 503 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 Q71RC1 249 aaPredicted RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 ANKRD37Q7Z713 158 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 DND1Q8IYX4 353 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 FGFRL1Q8N441 504 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 MFSD9Q8NBP5 474 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 OR2L3Q8NG85 312 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 OR4F17Q8NGA8 305 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 OR4F5Q8NH21 305 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 APOBEC4Q8WW27 367 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 ART4Q93070 314 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 PRRC1Q96M27 445 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TSNARE1Q96NA8 513 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 MTMR9Q96QG7 549 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 OR4F4Q96R69 305 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 RHNO1Q9BSD3 238 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 ST6GALNAC5Q9BVH7 336 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TDRD1Q9BXT4 1180 aaKnown RBP4.43□□□□□ -1.7
VRK1-203ENST00000555067 ANKRD60Q9BZ19 345 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 BLZF1Q9H2G9 400 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SYNDIG1Q9H7V2 258 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 NRN1Q9NPD7 142 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TUBGCP4Q9UGJ1 667 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SLC7A8Q9UHI5 535 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 VANGL2Q9ULK5 521 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 PPIAL4AQ9Y536 164 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 TIMM10BQ9Y5J6 103 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 SYNJ2O15056 1496 aa4.43□□□□□ -1.7
VRK1-203ENST00000555067 A0A0J9YVX5 310 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 LOC100506127A0A0U1RQW1 187 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 MEIOCA2RUB1 952 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 LRP5LA4QPB2 252 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 GABRR3A8MPY1 467 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SLCO1B7G3V0H7 640 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 ECDO95905 644 aaPredicted RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 LIFP15018 202 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PRKACAP17612 351 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 XRCC1P18887 633 aaPredicted RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 MMP11P24347 488 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 ANXA13P27216 316 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PPP2R1BP30154 601 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 RDXP35241 583 aaKnown RBP4.42□□□□□ -1.7
VRK1-203ENST00000555067 UGT1A5P35504 534 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 EPS15P42566 896 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 P2RY1P47900 373 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PGFP49763 221 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 RAB9AP51151 201 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 RIGQ13278 110 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SYCP1Q15431 976 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 KRTAP13-3Q3SY46 172 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 Q3ZCU0 254 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 FAM106AQ4KMX7 169 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 ATP1A1-AS1Q5TC04 95 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 LIN9Q5TKA1 542 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PLCXD3Q63HM9 321 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 CYS1Q717R9 158 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SH2D6Q7Z4S9 175 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 PIGZQ86VD9 579 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 KCNMB4Q86W47 210 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 TMEM17Q86X19 198 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 KIRREL3Q8IZU9 778 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SPAG16Q8N0X2 631 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 CEP112Q8N8E3 955 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 SDR9C7Q8NEX9 313 aa4.42□□□□□ -1.7
VRK1-203ENST00000555067 OR4C5Q8NGB2 326 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms