RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 ATP6V1G1O75348 118 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF254O75437 659 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AIFM1O95831 613 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CBX7O95931 251 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GLAP06280 429 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC25A4P12235 298 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 HOXB3P14651 431 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GABRA1P14867 456 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GJA1P17302 382 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NELFEP18615 380 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC6A9P48067 706 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PTH2RP49190 550 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NEK2P51955 445 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RRAS2P62070 204 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RPS25P62851 125 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ACTC1P68032 377 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ACTA1P68133 377 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC13A2Q13183 592 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF345Q14585 488 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SYT16Q17RD7 645 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GSG1Q2KHT4 349 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 POMZP3Q6PJE2 187 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TFAP2EQ6VUC0 442 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ASCL4Q6XD76 172 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 BTN2A1Q7KYR7 527 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ATG4DQ86TL0 474 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AKAP14Q86UN6 197 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 LRRTM4Q86VH4 590 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 IQCHQ86VS3 1027 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MIB1Q86YT6 1006 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TIGD4Q8IY51 512 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 RNF175Q8N4F7 328 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF527Q8NB42 609 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NPEPL1Q8NDH3 523 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 OR7G1Q8NGA0 311 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 BAHD1Q8TBE0 780 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SDCCAG3Q96C92 435 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 C8orf44Q96CB5 159 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZHX1-C8orf76Q96EF9 292 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 APOLD1Q96LR9 279 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SDF2Q99470 211 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF559Q9BR84 538 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ASPNQ9BXN1 380 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ARV1Q9H2C2 271 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 OR51I1Q9H343 314 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 EVA1BQ9NVM1 165 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CLDND1Q9NY35 253 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 FLRT3Q9NZU0 649 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MOSPD1Q9UJG1 213 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SPATA2Q9UM82 520 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 FAF1Q9UNN5 650 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 KLHL20Q9Y2M5 609 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ORC6Q9Y5N6 252 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 NUBP2Q9Y5Y2 271 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 LINC01553A4QN01 128 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MFSD2BA6NFX1 497 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 LEUTXA8MZ59 168 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 F8VVB4 439 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 F8VWA3 439 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GTPBP1O00178 669 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GABRPO00591 440 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CDC42EP2O14613 210 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AP3D1O14617 1153 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PIN1P1O15428 100 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ARHGEF9O43307 516 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 SLC28A2O43868 658 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PRAF2O60831 178 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GUCY1B2O75343 617 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ZNF217O75362 1048 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 APOA1P02647 267 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ITGB2P05107 769 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 URODP06132 367 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 DBIP07108 87 aaKnown RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TDGF1P13385 188 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CCL5P13501 91 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ITGB6P18564 788 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MST1P26927 711 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CD79BP40259 229 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 TAS2R50P59544 299 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MC1RQ01726 317 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 EGR3Q06889 387 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MESP2Q0VG99 397 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 FAPQ12884 760 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 GPR19Q15760 415 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 IMPG1Q17R60 797 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 COL28A1Q2UY09 1125 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 EIPR1Q53HC9 387 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 FAM69AQ5T7M9 428 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 Q6ZPB1 254 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 VASH1Q7L8A9 365 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 KCTD20Q7Z5Y7 419 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ADGRD2Q7Z7M1 963 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PAQR4Q8N4S7 273 aaPredicted RBP3.18□□□□□ -1.9
SEC23A-207ENST00000554615 CELF2-AS1Q8N7Q2 184 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 PLPP7Q8NBV4 271 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 AP3S1Q92572 193 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 MAL2Q969L2 176 aa3.18□□□□□ -1.9
SEC23A-207ENST00000554615 ADIPOR1Q96A54 375 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms