RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 NPTNQ9Y639 398 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 LAMC1P11047 1609 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 COL22A1Q8NFW1 1626 aaPredicted RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 NLRP1Q9C000 1473 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 CHD2O14647 1828 aaKnown RBP3.65□□□□□ -1.83
SCAF11-210ENST00000547654 FAM135AQ9P2D6 1515 aa3.65□□□□□ -1.83
SCAF11-210ENST00000547654 DISP2A7MBM2 1401 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 MROH1Q8NDA8 1641 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 IQCMA0A1B0GVH7 501 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FAM74A7A6NL05 159 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 POLR2DO15514 142 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 DFNA5O60443 496 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 LMX1BO60663 402 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 DUSP11O75319 330 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 BBOX1O75936 387 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FLOT1O75955 427 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ECDO95905 644 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 KRT6AP02538 564 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FRMD6-AS1P0C7T7 363 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR8G3PP0DMU2 310 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 CYP2B6P20813 491 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 CALML3P27482 149 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 HPCAL1P37235 193 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FDFT1P37268 417 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ID1P41134 155 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR1G1P47890 313 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ZFP36L2P47974 494 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 EIF3EP60228 445 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 RPS15P62841 145 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 EWSR1Q01844 656 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 EIF2B1Q14232 305 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 SLC17A1Q14916 467 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 SNAI3Q3KNW1 292 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 GTDC1Q4AE62 458 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 GGTA1PQ4G0N0 100 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FAM74A3Q4VXF1 159 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 XKR7Q5GH72 579 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 SLX4IPQ5VYV7 408 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ATL3Q6DD88 541 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR2A2Q6IF42 318 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 PNCKQ6P2M8 343 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 RNASEKQ6P5S7 137 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 BHLHB9Q6PI77 547 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 VITQ6UXI7 678 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 KIF6Q6ZMV9 814 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 UTS2BQ765I0 119 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 EGFL6Q8IUX8 553 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 NAGSQ8N159 534 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 CIARTQ8N365 385 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR9Q2Q8NGE9 314 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 OR1L4Q8NGR5 311 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 MAIP1Q8WWC4 291 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 HPSE2Q8WWQ2 592 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ADIPOR1Q96A54 375 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ISG20Q96AZ6 181 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 C11orf24Q96F05 449 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 PELI1Q96FA3 418 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 IFT74Q96LB3 600 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 C12orf66Q96MD2 445 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 TUBGCP2Q9BSJ2 902 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 FEM1AQ9BSK4 669 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 RPP25Q9BUL9 199 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 NXF5Q9H1B4 397 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 LRRN3Q9H3W5 708 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 XKR8Q9H6D3 395 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 TMEM185BQ9H7F4 350 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 GPN2Q9H9Y4 310 aaPredicted RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ZNF160Q9HCG1 818 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 MRPL39Q9NYK5 338 aaKnown RBP3.64□□□□□ -1.83
SCAF11-210ENST00000547654 TAAR2Q9P1P5 351 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 KLK11Q9UBX7 282 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 CYTH4Q9UIA0 394 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 ANAPC7Q9UJX3 599 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 PZPP20742 1482 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 NEDD4P46934 1319 aa3.64□□□□□ -1.83
SCAF11-210ENST00000547654 PREX2Q70Z35 1606 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SETD5Q9C0A6 1442 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 A2MP01023 1474 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NCOA2Q15596 1464 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 PPIAL4EA0A075B759 164 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NPIPA5A0A0B4J1W7 369 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 A0A1B0GTQ1 180 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 LINC00854A0A1B0GVQ3 168 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SMCO3A2RU48 225 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR2AG2A6NM03 316 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 SUPT3HB4E1H0 165 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 C9JVG2 144 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NPIPA7E9PJI5 369 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NPIPA5E9PKD4 350 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NEDD8-MDP1E9PL57 170 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 OR7A17O14581 309 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 NBR2O15453 112 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 ARHGEF9O43307 516 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CIDEAO60543 219 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 TRIM3O75382 744 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 CDC123O75794 336 aaPredicted RBP3.63□□□□□ -1.83
SCAF11-210ENST00000547654 IGSF6O95976 241 aa3.63□□□□□ -1.83
SCAF11-210ENST00000547654 FHP07954 510 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms